Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00610 ATGGCTATACAGGCACAGTTTTATTGTTCAAGTAACAACAATGATGTATCTCCTTTTTGCAACAATGGTTATTATTGTGATGATGGACTTTTTGATTCTTCGTCATCGTGTTTTAATCTTCAACAACAACATCATCAGAAAGAACAATTACAATTGCAACAAGGTTTGCAGCAGTCATACAATGAAGACCAAATGGTTGGTTATGATGATTTTACTAATCTCTTTTATTATGATCCAAAACTCAACAACAATCATCCAACACCATCAAAAACTCCACCTACTTTTGCTGCTCAAGATGATATACAGAGAGACCAGGTTGATCATTACATCAGATTAGAGAATGCAAAGTTGAGATTTATGTTACAAGAGCAAGATAAACAACAAGTGGCATCATTATTGAAGAAGTTTGAATCTCGATCACTCTCTATGCTGATGGAGAAAGATGAAGAGATAGCACAGGTTTCAATGAAAAGGATAGAATTGGAAAATTATTTAAGAAGACTAGAGGCAGAAAACCAAGCATGGCAAAAAGCAGCACAAGAAAACGAAGCAATGGCATTGTCTTTGCACAAAACATTAGAAGAGATGAAAGAAAAAATGGTAGTGGGAACAAAGGACGAAGAATCATGTTGTGATGAAGCACACTTTGAAGAAGAACATGATAATCTTAATGATAATATCATGATGTTATGTAAAAGTTGTCATTCTAGGATTTCGTGTTATTTATTTCTTCCATGCAGGCACCTTTCTTCATGCAAAGAATGCGAGACATTTCTTGAAGCTTGTCCTGTTTGTGGAATGCAAAAGAAAGGTAGTATAGAGACTTTGATTTTCTAA 837 0.3453 MAIQAQFYCSSNNNDVSPFCNNGYYCDDGLFDSSSSCFNLQQQHHQKEQLQLQQGLQQSYNEDQMVGYDDFTNLFYYDPKLNNNHPTPSKTPPTFAAQDDIQRDQVDHYIRLENAKLRFMLQEQDKQQVASLLKKFESRSLSMLMEKDEEIAQVSMKRIELENYLRRLEAENQAWQKAAQENEAMALSLHKTLEEMKEKMVVGTKDEESCCDEAHFEEEHDNLNDNIMMLCKSCHSRISCYLFLPCRHLSSCKECETFLEACPVCGMQKKGSIETLIF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00610 278 PIRSF SBP1_RNase_bind 4 278 IPR017066 -
Adu03g00610 278 Gene3D Death Domain, Fas 120 239 IPR011029 -
Adu03g00610 278 Coils Coil 151 185 - -
Adu03g00610 278 ProSiteProfiles Zinc finger RING-type profile. 231 265 IPR001841 -
Adu03g00610 278 Pfam Zinc finger, C3HC4 type (RING finger) 230 268 - -
Adu03g00610 278 Gene3D - 240 275 - -
Adu03g00610 278 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 277 - -
Adu03g00610 278 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 277 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00610 Adu-Chr3 5570810 5572130 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00610 K19042 - gmx:100789863 226.868