Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00607 ATGGAACTCAACCTCTGCGTGAACTACCATAACCGTCACGCTTTCAGATTCACCTCTCCTTCCGCTTTCTCTCTCTCCACTCTCCGTTCCGTCCGCACTCACTTCCTCGGTTCCGCCCACACTCTCCGTCCTCCACTACCACCTCTTCAATCTCGCAAGAAATGCAACAGGTTAGGGCTTCTCCGCCTCCACTCACCGCGCTTCGTCTTCAAGGCTTCTTTGCAATCTCACTCTCTCATCGTCGTTGTCGTCCTCGTCACCTTATCCGCCGTTTCTATCCTCCGATTCACTCTCAATAACCGAAAGAAGTCTCGCAATCAGACACGTGGACATGCAAAATTTGCATTATCGCGACAAGGAAGCAATGTGGGGAACCAGGTCATTGAAAGCCAGATTCTCGGTTTTCCAGAATTTCAAAGGGATAACCCGTTGAGTGAAATTGGAAATCTAACAGATCACAATGCAGAAGATAACCATATTCTCGAGGACAAAGAGTCTCAGCTTCCGTTATTGAAATCTTCATTGGTTCACGAAGCATCCTTCATGACCAACATATCAGATTCATCTACTCCTGTTCTTGACTCCAGTTTCAATAATAGTAGTTCGAGAGTTTTAGAAGAGTCTATTTTGCCAGATGCTTTCCAATCAACTGTGTTGCAACCTCTAGCTTTTGCTGAAGAAATGGCTTTACAAGTAGAAGAAAATCAAGATCAAGCTGACTCTGATCCTGAGTCACCTTTGACTATAGTTAAATCTGAGCATGCCACTTCTTCTGTTGGTGTAAACAATGAACTCACAACAATCGATGAACAAACTAAAGAAAACATTGATGCCATCAGCTTTGATGTCCTTTTCGGTGAATCAGCGAGGCAAGAGCTGTACATGTTTTATGAGGATAACAAGTCTACAGTTGGGTCCATGACACCACTTAGTAGTCTAAAGTCGTTATCTCTTCATGCTTCAACTAATAATGTTAAAGGATTGCCCTCAACAATGAGAAATACCACACTAAAAGGATCTGATATCTCAACAGAATTTTCTCCACAAGGTGCAGAATATATTGAAGGAGTGGTACCAATTTCCAGTCACACAGAAGGCTACACTCCACAAAATGGAAGTAAACACTCGAGGAAAGGTGGCAGAGCTCTGCCTGCCAAAGTTTTTCCCAACAATGGCCACTCAATCAACATGCAATTTGATCAGAAAAGTGATCAAACAAGGGTGGAGGATGATCAGAAGAATGACCATTCAGATTATCTGAGCAGATATAATAAGCTGTTAAAAGCTGCGAGGTTACATGAAAGTTTAGAATTGCTTAAAGATATGGAAACAAAGGGTTTATTAGATATGACCAAGATTTATCATGCAAAGTTTTTTAACGTCTGCAAGAGGAAAAGGGCAGTTAAAGAAGCTTTTGATTACATTAGGCTAATTCCAAATCCAACTTTGAGTACATTTAACATGCTTATGTCAGTGTGTACAAGCTCCCAAGATTCAGAAAGGGCTTTCGAAGTGTTGAAGCTACTGAAAGAGGCTCGACTAGAACCTGATTGCAAACTTTATACCACTCTGATTTCCACTTGTGCTAAGAGTGGAAAAGTTGATACAATGTTTGAAATGTTTCACAAGATGGTTAATTCTGGAGTGGAACCCAATGTTCATACCTATGGGGCACTCATTGATGGTTGTGCTAGAGCTGGGCAAATAGCAAAAGCATTTGGTGCTTATGGAATATTGAGGTCCAAGAATGTGAAGCCAGATCGTGTTGTATTCAATGCACTTATAGCTGCATGTGCTCAGTCAGGAGCGGTGGATCGTGCTTTTGATGTTTTAGCAGAAATGGCAGCTGAAATACAACCCATTGACCCAGATCACATAACTATTGGTGCATTGATGAAGGCTTGTGCAAATGCTGGTCAGGTTGAACGGGCACTAGAAGTGTATAAGATGTTACAAAAATATAATTTAAAGGGAACTCCAGAAGTTTACACGATTGCCATTAATTCTTGCAGCCAAACTGGAGATTGGGAATTTGCATGTAGTGTTTACAATGACATGACCCAGAAAGGGGTTCTCCCTGATGAGATGTTTCTGAGTGCACTGATAGATGTTGCTGGACATGCGAAAAAGCTGGATGCTGCCTTTGATGTCCTCAAAGAAGCTCGTAAAGGAGGAATACATATTGGAATGATGTCATATAGCTCGCTAATGGGTGCCTGTAGCAATGCAAGAAATTGGGAAAAGGCATTGGAGCTATATGAATATCTCAAGGCACATAAATTGGTGCGAACAGTTTCAACAGTTAATGCTTTGCTCACTGCGCTTTGTGATGGAAATCAATTTCAGAGGGCTTTGGAAGTTTTATCTGAAATGAAAGGATTGGGATTGTGCCCAAACAGTATCACATTCTCAGTACTGTTAACAGCAAGCGAGAAAAACGATGATATGGAAGCAGCTCAAATGCTTCTTTCTCAAGCCAAAATGGAGGGTGTTGCCCTTAATGTCAACATGTGTCGATGCATAATTGGAATGTGCCTGCAAAGATATGAGAGGGATTGCTTTGTTGGTGAACCTGTTTTATCTTTCAACTCAGGACGGGCCCAAGTCAATAATAAATGGACATCACTGGCTTTAGCAGTGTATCGTGAAACACTTGGAGCTGGTGAAAAACCTACAAGTGAAATACTGTCGCGACTTCTGGGATGCTTACAACTCCCTTATGATGCATCTGTCAAGAATAGACTAGTTGACAACCTGGGAGTAAGCACTGAATCTTCAAGAAACTCAAACCTTCGCGCATTAGTAGATGGTTTTGGGGAATATGATGTTCGTGCTTTTTCAATACTAGAGGAAGCTGCTTCATATGGAGTTGTTTCATCAGTATCATTCAAAGTGAGTCCTATTGTTGTTGATGCTAAGGACATGCATACGTCTACTGCTGAGGTTTATCTCTTAACTGTTTTGAAAGGTCTCAAGCATCGACTGGCAGCAGGTGCAAGATTATCCAATATAATAATTTTACTGCCGGTAGAGAAAACAAAAGTTTCAACTCAAAAGGGGGAAAAGATGATCAACTTGGCTAACAGAGTTGGCCAGGCAGTTGCAGCTTTATTCAGGAGACTTAAAATTCCTTACCAGGGTCACGAATCGAGTGGGAAGCTTAGAATTAATGGTCTAGCTCTGAAGAAATGGTTTCAGCCGAAACTTGCATCATTCAGTGGGAAACCAGGTGACTGGAGCTCATCCCCATCAAGACTGGGCAAACGCATTAGCCATCAGCAGCGAAGGATTCGAACCGGCAATTTATCTTTGGACTAA 3318 0.4183 MELNLCVNYHNRHAFRFTSPSAFSLSTLRSVRTHFLGSAHTLRPPLPPLQSRKKCNRLGLLRLHSPRFVFKASLQSHSLIVVVVLVTLSAVSILRFTLNNRKKSRNQTRGHAKFALSRQGSNVGNQVIESQILGFPEFQRDNPLSEIGNLTDHNAEDNHILEDKESQLPLLKSSLVHEASFMTNISDSSTPVLDSSFNNSSSRVLEESILPDAFQSTVLQPLAFAEEMALQVEENQDQADSDPESPLTIVKSEHATSSVGVNNELTTIDEQTKENIDAISFDVLFGESARQELYMFYEDNKSTVGSMTPLSSLKSLSLHASTNNVKGLPSTMRNTTLKGSDISTEFSPQGAEYIEGVVPISSHTEGYTPQNGSKHSRKGGRALPAKVFPNNGHSINMQFDQKSDQTRVEDDQKNDHSDYLSRYNKLLKAARLHESLELLKDMETKGLLDMTKIYHAKFFNVCKRKRAVKEAFDYIRLIPNPTLSTFNMLMSVCTSSQDSERAFEVLKLLKEARLEPDCKLYTTLISTCAKSGKVDTMFEMFHKMVNSGVEPNVHTYGALIDGCARAGQIAKAFGAYGILRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAEIQPIDPDHITIGALMKACANAGQVERALEVYKMLQKYNLKGTPEVYTIAINSCSQTGDWEFACSVYNDMTQKGVLPDEMFLSALIDVAGHAKKLDAAFDVLKEARKGGIHIGMMSYSSLMGACSNARNWEKALELYEYLKAHKLVRTVSTVNALLTALCDGNQFQRALEVLSEMKGLGLCPNSITFSVLLTASEKNDDMEAAQMLLSQAKMEGVALNVNMCRCIIGMCLQRYERDCFVGEPVLSFNSGRAQVNNKWTSLALAVYRETLGAGEKPTSEILSRLLGCLQLPYDASVKNRLVDNLGVSTESSRNSNLRALVDGFGEYDVRAFSILEEAASYGVVSSVSFKVSPIVVDAKDMHTSTAEVYLLTVLKGLKHRLAAGARLSNIIILLPVEKTKVSTQKGEKMINLANRVGQAVAALFRRLKIPYQGHESSGKLRINGLALKKWFQPKLASFSGKPGDWSSSPSRLGKRISHQQRRIRTGNLSLD 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00607 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 764 798 IPR002885 -
Adu03g00607 1105 Coils Coil 809 829 - -
Adu03g00607 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 659 693 IPR002885 -
Adu03g00607 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 552 586 IPR002885 -
Adu03g00607 1105 Pfam Pentacotripeptide-repeat region of PRORP 485 623 IPR033443 -
Adu03g00607 1105 Pfam Pentacotripeptide-repeat region of PRORP 632 805 IPR033443 -
Adu03g00607 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 517 551 IPR002885 -
Adu03g00607 1105 Gene3D Tetratricopeptide repeat domain 456 619 IPR011990 GO:0005515
Adu03g00607 1105 Gene3D Tetratricopeptide repeat domain 706 934 IPR011990 GO:0005515
Adu03g00607 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 587 617 IPR002885 -
Adu03g00607 1105 TIGRFAM PPR: pentatricopeptide repeat domain 767 799 IPR002885 -
Adu03g00607 1105 TIGRFAM PPR: pentatricopeptide repeat domain 554 587 IPR002885 -
Adu03g00607 1105 TIGRFAM PPR: pentatricopeptide repeat domain 662 695 IPR002885 -
Adu03g00607 1105 TIGRFAM PPR: pentatricopeptide repeat domain 627 657 IPR002885 -
Adu03g00607 1105 TIGRFAM PPR: pentatricopeptide repeat domain 732 763 IPR002885 -
Adu03g00607 1105 TIGRFAM PPR: pentatricopeptide repeat domain 485 518 IPR002885 -
Adu03g00607 1105 TIGRFAM PPR: pentatricopeptide repeat domain 520 553 IPR002885 -
Adu03g00607 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 624 658 IPR002885 -
Adu03g00607 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 482 516 IPR002885 -
Adu03g00607 1105 MobiDBLite consensus disorder prediction 1072 1093 - -
Adu03g00607 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 729 763 IPR002885 -
Adu03g00607 1105 Gene3D Tetratricopeptide repeat domain 620 691 IPR011990 GO:0005515
Adu03g00607 1105 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 72 1105 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00607 430 848 Glycosyltransferase AT1G05670 24.766 3.99e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00607 - - gmx:100814164 1531.15