Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00587 ATGGGCTTTCGCTTACCAGCTATTAGAAGAGCATCATCTGCTGTTAGCCAAGAATCTTCCAAAGCTGTGGAAGTTCCGAACGGCTATCTCGCAGTCTATGTTGGAGACAAAATGAAGCGGTTTGTGATTCCAATTTCATATTTAAATCAACCTTTGTTTCAAGAGTTACTAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGAGGTCTCACTATTCCTTGCAAAGAGGATGCTTTCATGGACCTCATCACTTCTCGCTTGAATGGATTATAA 282 0.4078 MGFRLPAIRRASSAVSQESSKAVEVPNGYLAVYVGDKMKRFVIPISYLNQPLFQELLSQAEEEFGYDHPMGGLTIPCKEDAFMDLITSRLNGL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00587 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 7 91 IPR003676 GO:0009733
Adu03g00587 93 Pfam Auxin responsive protein 12 87 IPR003676 GO:0009733
Adu03g00587 93 PANTHER AUXIN-INDUCED PROTEIN 10A5 7 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00587 Adu-Chr3 5408691 5409218 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00587 24 86 Calmodulin-binding Proteins AT3G43120 53.968 1.10e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00587 K14488 - gmx:100806671 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00587 03 5408691 5409218 Adu03g00587 03 5408691 5409218 ECH