Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00547 ATGTTTGTTACAGATATTGGTGTGATGAGTGGAGCAGCTATGTACATAAAGCGAGATCTGAGAATTTCGGATGTGAAGATTGAAATCCTTGCCGGTATAATAAACTTGTACTCTCCAATAGGTTCATACATAGCAGGAAGAACCTCCGATTGGATTGGTCGCCGTTACACTATTATACTGGCCGCCGTAATTTTCTTCGTCGGAGCAATTCTGATGGGATTTTCACCAAACTATGCTTTCCTAATGTTCGGCCGGTTTGTCGCCGGCATAGGAATCGGTTTTGCTTTCCTCATTGCACCCGTTTACACCTCAGAAATCTCTCCTACTTCTTCCCGTGGCTTCCTCTCTTCCTTGCCTGAGGTGTTTTTGAACGGAGGAATATTGCTTGGATACATCTCAAACTATGCATTTTCAAAGCTTTCACTTCGAATGGGTTGGCGGTTGATGCTAGGAGTAGGAGCGATTCCTTCAATGTTCCTAGCCGTGGCGGTTTTAGCCATGCCGGAATCACCAAGGTGGCTCGTTTCGGAGTGCAACGACGACGTCGTTCCCATCACAAAGAAGAAGCAAGGCAAGGGTGTATGGAAGGAGCTTCTCCTTTATCCTACACCCGCGGTGCGCCACATCTTCATCGCTTCCTTAGGGATTCACTTCTTTGCGCAAGCTACCGGCATAGACGCCGTCGTTTTGTACAGTCCTAGAATCTTCGAGAAGGCTGGGATCAAATCTGATAATAAAAAGCTTCTCGCAACGGTAGCCGTTGGATTCGTCAAAACGGTTTTCATCTTAGTGGCCACTTTTTTCCTGGATCGTGTTGGAAGACGCAAGTTGCTGTTAAGCAGCGTTAGCGGTTTGATAATCTCGCTTCTAACCCTTGCGGTGAGTCTCACCGTAGTGAATCGTTCGAAGACGACGTTGAACTGGGCCATTGGGCTTAGCATAGCCTCGGTTTTGTCCTATGTGGGCTCGTTCTCGATTGGGTCTGGGCCCATTACGTGGGTTTATAGTTCGGAGATATTTCCGTTGAGGCTGCGCGCTCAGGGTGTGGCTATTGGAGCTGTGGTGAATAGGGTCACCAGTGGAGTGATCTCAATGACCTTTTTGTCCCTCACGAAGGCAATTACCACTGGTGGGGCATTCTTTCTCTTTGCTGGAATTGCAGCTGCTGCGTGGGTATTTCACTATACTCTGCTCCCTGAAACGCGCGGCAAAACTCTTGAAGAAATTGAAGGATCTTTCGGTAATTTCTGCAGAAAATCTAAGAATAGTGCTAACGGGGAGGGACTTAACCGTAATAGCACTGGTAATGGCCAGATCCAATTGGGGACCAACGGCCAGAACCAGCCTTTGGCAAGTGTGGATTAA 1365 0.4777 MFVTDIGVMSGAAMYIKRDLRISDVKIEILAGIINLYSPIGSYIAGRTSDWIGRRYTIILAAVIFFVGAILMGFSPNYAFLMFGRFVAGIGIGFAFLIAPVYTSEISPTSSRGFLSSLPEVFLNGGILLGYISNYAFSKLSLRMGWRLMLGVGAIPSMFLAVAVLAMPESPRWLVSECNDDVVPITKKKQGKGVWKELLLYPTPAVRHIFIASLGIHFFAQATGIDAVVLYSPRIFEKAGIKSDNKKLLATVAVGFVKTVFILVATFFLDRVGRRKLLLSSVSGLIISLLTLAVSLTVVNRSKTTLNWAIGLSIASVLSYVGSFSIGSGPITWVYSSEIFPLRLRAQGVAIGAVVNRVTSGVISMTFLSLTKAITTGGAFFLFAGIAAAAWVFHYTLLPETRGKTLEEIEGSFGNFCRKSKNSANGEGLNRNSTGNGQIQLGTNGQNQPLASVD 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00547 454 ProSitePatterns Sugar transport proteins signature 1. 45 62 IPR005829 GO:0016021|GO:0022857|GO:0055085
Adu03g00547 454 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 402 IPR020846 GO:0022857
Adu03g00547 454 SUPERFAMILY MFS general substrate transporter 2 410 IPR036259 -
Adu03g00547 454 Gene3D MFS general substrate transporter like domains 181 415 IPR036259 -
Adu03g00547 454 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 177 433 IPR045262 GO:0015144
Adu03g00547 454 Pfam Sugar (and other) transporter 188 411 IPR005828 GO:0016021|GO:0022857|GO:0055085
Adu03g00547 454 Pfam Sugar (and other) transporter 23 177 IPR005828 GO:0016021|GO:0022857|GO:0055085
Adu03g00547 454 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 177 433 - -
Adu03g00547 454 MobiDBLite consensus disorder prediction 424 454 - -
Adu03g00547 454 ProSitePatterns Sugar transport proteins signature 2. 87 112 IPR005829 GO:0016021|GO:0022857|GO:0055085
Adu03g00547 454 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 4 177 IPR045262 GO:0015144
Adu03g00547 454 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 4 177 - -
Adu03g00547 454 Gene3D MFS general substrate transporter like domains 1 180 IPR036259 -
Adu03g00547 454 PRINTS Sugar transporter signature 337 349 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00547 454 PRINTS Sugar transporter signature 220 230 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00547 454 PRINTS Sugar transporter signature 314 335 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00547 454 PRINTS Sugar transporter signature 82 101 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00547 Adu-Chr3 5148637 5151107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00547 5 446 Organic Solute Cotransporters AT3G18830 60.000 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00547 - - adu:107476619 836.254