Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00542 ATGGCCTCAGCATCAGCATCAGCAACTCTTCTAAAATCATCCCCAGTTCTCGACAAGTCTGAGTGGGTTAAAGGCCAAACACTTCGCCAAACTGCAGTGTCTCTTGCAAGAACTAACTCTGCCACCCCTTCACCACTCACCATCAGAGCTGGTTCCTATGCCGACGAGCTCGTAAAGACCGCCAAAACTATTGCCTCACCGGGGCGTGGTATTCTGGCCATGGATGAGTCGAATGCTACCTGTGGGAAGCGTTTGGCTTCAATTGGGTTAGAGAACACCGAAGCTAACCGCCAAGCATACCGTACCCTGCTTGTGTCAGCACCAGGCCTTGGTCAGTTCATATCTGGCGCCATTCTCTTTGAGGAAACTCTCTACCAATCCACCGTTGATGGCAAGAAGATTGTTGATGTACTTGTTGAGCAAAACATTGTTCCCGGTATCAAAGTTGACAAGGGTTTGGTGCCATTGGCTGGTTCCAATGATGAGTCATGGTGCCAAGGTTTGGATGGTCTTGCCTCTCGTTCAGCTGCATACTACCAGCAAGGTGCTCGTTTCGCCAAATGGCGTACCGTTGTGAGCATCCCCAATGGTCCTTCTGCTCTTGCAGTTAAGGAAGCAGCCTGGGGTCTGGCTCGCTATGCTGCCATTTCTCAGGACAATGGCTTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGTGAACATGGCATTGACAGGACTTTTGAGGTAGCGAAAAAGGTTTGGGCTGAGGTATTCTTCTACCTTGCTGAGAACAATGTCCAGTTTGAGGGTATCCTCCTTAAGCCTAGCATGGTTACTCCTGGAGCCGAGTCCAAGGACAGGGCCTCTCCTCAGAAAGTTGCTGACTACACACTCAAGCTTCTTCACAGCAGAATTCCTCCGGCCGTCCCCGGAATTATGTTCTTGTCTGGTGGACAATCTGAGGTGGAAGCAACTCTCAACTTGAACGCAATGAACCAATCTCCAAACCCATGGCATGTGTCCTTCTCATATGCCAGAGCCCTCCAAAACACTTGCTTGAAGACATGGGGAGGCCGTCCGGAGAATGTCAAGGCTGCTCAAGATGCCCTCCTTTTCCGTGCCAAGTCTAACTCGCTTGCTCAGCTTGGAAAGTACACCGGCGAGGGCGAATCCGAGGAGGCCAAGAAGGAGTTGTTTGTGAAGGGCTACTCCTACTAA 1203 0.5087 MASASASATLLKSSPVLDKSEWVKGQTLRQTAVSLARTNSATPSPLTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQFISGAILFEETLYQSTVDGKKIVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAKKVWAEVFFYLAENNVQFEGILLKPSMVTPGAESKDRASPQKVADYTLKLLHSRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDALLFRAKSNSLAQLGKYTGEGESEEAKKELFVKGYSY 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00542 400 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 28 400 IPR000741 GO:0004332|GO:0006096
Adu03g00542 400 SUPERFAMILY Aldolase 46 400 - -
Adu03g00542 400 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 28 400 - -
Adu03g00542 400 Pfam Fructose-bisphosphate aldolase class-I 56 400 IPR000741 GO:0004332|GO:0006096
Adu03g00542 400 CDD FBP_aldolase_I_a 54 380 - -
Adu03g00542 400 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 261 271 IPR029768 -
Adu03g00542 400 Gene3D Aldolase class I 36 399 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00542 Adu-Chr3 5096709 5099021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00542 53 400 Miscellaneous Gene Families AT3G52930 55.682 1.96e-133 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00542 K01623 - gmx:100818383 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00542 03 5096709 5099021 Adu03g00542 03 5096709 5099021 ECH