Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00541 ATGAAGGGAGTGTTTGTAGTTGCGCTCATTGCATTTCCATTCTTGATGGCTGCCAAGTTAGCGAGTGGAAGTCACGACTACCAAGACGCGTTGACGAAGGCAGTACTGTTCTTTGAAGGCCAGAGGTCAGGGTTCTTGCCGCAGGACCAGAGGATGAGCTGGCGTAGCAACTCCGGACTCAGCGACGGATGGACCTACAACGCCGATCTCGTTGGCGGTTACTACGACGCCGGCGACAACATCAAGTTTGGGTTTCCGATGGCATTCACCACCACTATGCTCGCTTGGAGCGTCCTTGAGTTCGGTGCCATCATGCCTCCCAATGAACTCAGAAACGCAATGCTTGCAATCCGTTGGGCTACTGATTACTTGCTCAAGACCGTTTCTCAGCCTAATCGGATTTTTGTTCAGGTGGGGGATCCACGCTCAGACCATGATTGTTGGGAGAGGCCTGAGGACATGGACACAGCCAGGACGGTGTACGCTGTTGATGCCCCAAACGCGGCTTCTGATGTTGCCGGTGAAACCGCGGCCGCGCTCGCAGCCTCATCCTTGGTATTCTGGTCAACTGACCCGGGTTATGCAGAAACATTGTTACGGAATGCTATTAGTGCCTTCCAATTTGCAGATAACTACAGGGGTGCTTACAGTGACAATGCCAATGTTAAGTATAGTGCTTGCCCATATTATTGTGATTTTGATGGATATCAGGACGAGTTATTGTGGGGTGCGGCATGGCTAAGAAGGGCCACGAAGGATGATAATTTCCTCAACTACCTTCAAACCAATGGCAAAACGCTTGGTGCTGACGACAACATCAATGAATTTGGTTGGGACAACAAGCATGCTGGCCTCAATGTTCTTGTCTCCAAGGAAGTCTTTGAAGGAAATCTATACTCACTTGAATCCTTCAAGGCGTCGGCCGAAAGCTTCATGTGCACGCTCATACCCGAATCTCCTAGCTCACACATAGAGTACACTCCTGGTGGACTTTTGTTTAGGCCCGGAGGGAGTAACTTGCAACATGCTACTTCAATTTCATTCCTTGAGTTGGTTTATGCTAATTACTTGGATCACACGTCACAGTCCCTCAATTGTGGGAATGTTGTCGTTAGCGCTCAAACACTTCGGCAACATGCTAAGAGGCAAGTTGATTACATTCTGGGTGATAATCCAATGGGGTTATCGTACATGGTTGGATATAGCAACTACTATCCGCAGCGCATTCATCACCGTGGCTCCTCTTTACCTTCCATCAAGGATCATCCTCAGTTTATTGCATGCAAGGAAGGTTCAATGTACTACAACTCCACTGATCCAAACCCAAATGTGCTTGTGGGAGCCATCGTTGGAGGACCTGGGGAAGATGATGTGTATGTGGATAATAGGGATGATTTTAGAAAATCCGAGCCAACCACATACATCAATGCACCATTTATTGGTGTTCTAGCATATTTTGCTGCTAATCCTAACTTCAGTTAA 1482 0.4804 MKGVFVVALIAFPFLMAAKLASGSHDYQDALTKAVLFFEGQRSGFLPQDQRMSWRSNSGLSDGWTYNADLVGGYYDAGDNIKFGFPMAFTTTMLAWSVLEFGAIMPPNELRNAMLAIRWATDYLLKTVSQPNRIFVQVGDPRSDHDCWERPEDMDTARTVYAVDAPNAASDVAGETAAALAASSLVFWSTDPGYAETLLRNAISAFQFADNYRGAYSDNANVKYSACPYYCDFDGYQDELLWGAAWLRRATKDDNFLNYLQTNGKTLGADDNINEFGWDNKHAGLNVLVSKEVFEGNLYSLESFKASAESFMCTLIPESPSSHIEYTPGGLLFRPGGSNLQHATSISFLELVYANYLDHTSQSLNCGNVVVSAQTLRQHAKRQVDYILGDNPMGLSYMVGYSNYYPQRIHHRGSSLPSIKDHPQFIACKEGSMYYNSTDPNPNVLVGAIVGGPGEDDVYVDNRDDFRKSEPTTYINAPFIGVLAYFAANPNFS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00541 493 SUPERFAMILY Six-hairpin glycosidases 15 488 IPR008928 GO:0005975
Adu03g00541 493 PANTHER ENDO-1,4-BETA-GLUCANASE 8 492 - -
Adu03g00541 493 PANTHER ENDOGLUCANASE 24 8 492 - -
Adu03g00541 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 386 412 IPR018221 -
Adu03g00541 493 Gene3D - 24 489 IPR012341 GO:0005975
Adu03g00541 493 Pfam Glycosyl hydrolase family 9 27 483 IPR001701 GO:0004553|GO:0005975
Adu03g00541 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 459 477 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00541 Adu-Chr3 5091139 5095127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00541 4 489 Glycoside Hydrolase AT1G70710 59.053 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00541 K01179 - gmx:100101849 884.404