Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00514 ATGTCTGGACCACTCGATCGTTTCGCTAGACCATGCTTTGAGGGGTTCTCTGGCAGTGATGAGAAAAAGGAAAGAAGATCTGATTTTGAGAACTCTGAGGATGAGAGGAGGACAAGAATTGGATCTCTGAAGAAGAAGGCGCTCAATGCATCGTCGAAATTCAAGCATTCTTTAAAGAAAAAGAGTAGCAGAAGAAAAAGTGACGGACGAGTCAGTTCGGTTTCGATTGAGGATGTTCGGGATGTGGAGGAGCTACGGGCTGTAGATGCATTTAGGCAGTCATTGATTATGGACGAATTGCTTCCTGAGAAACATGATGATTACCATATGATGTTAAGGTTTCTTAAAGCAAGGAAGTTTGATATTGACAAAGCAAAGCATATGTGGGCTGATATGCTACAATGGAGGAAGGAGTTTGGTGCTGACACTATAATGGAGGATTTTGAGTTCAAAGAGTTCAACGAAGTTGTAAAGTACTATCCGCATGGCTATCACGGTGTCGATAAGGAGGGAAGACCTGTTTACATTGAAAGGCTTGGAAAAGTGGATCCAAACAAAATCATGCAAGCTACAACTCTCGACAGATATGTAAAGTATCATGTACAGGAGTTTGAGAAAGCTTTTGCGATAAAGTTTCCTGCTTGCACAATCGCTGCCAAAAGGCACATAGATTCAAACACCACGATCTTAGATGTTCAGGGCGTGGGCCTTAAGAACTTTAACAAGACTGCCCGAGAACTCATTATGCGATTACAGAAGATTGATAGTGACAATTATCCTGAAACTCTTTGCCAAATGTTTATCATAAATGCTGGCCCTGGATTTAGATTGCTTTGGAACACTATCAAGTCCTTCCTTGATCCCAAAACAACTTCCAAGATTCATGTTCTTGGAAACAAGTACCAAAGCAAATTGCTTGAAATAATTGATGTCAGTGAGTTGCCAGAATTTCTGGGAGGTACATGCACATGCGCAGATCAGGGAGGTTGCCTCAGATCTGATAAAGGGCCTTGGAAAAACCCTGAAATATTGAAGATGATTCTCAACGGTGAAACACGGGGCACAAGGCAGATAGTAAAGGTTTTGAACAGTGAAGGGAAGGTTATTGCATATGCTAAACCGCGATTCCCAATGGTTAAAAGCAGTGATACTTCGACAGCTGAATCAGGGTCTGAAGCTGAAGATATGGCTTCTCCAAAAGCGATGAAAAGCTATGGGCACCTTAGATTGACGCCTGTCCGGGAGGAAGCCAAGGTAGTTGGAAAGACAAGCTATGCTGGTACTAGTAACTTATCTGGGTATGATGAATATGTTCCAATGGTGGACAAAGCTGTTGATGCTGGCTGGAAGAAACAAGCTTCACTCCAGATGTCTCAAACGTCTAAAGGAACGTCTCCCCCTCCTGAAACTCCTAAAGCACCAGAAAAGATCCATGCTCGGATTTGGGTAGCCCTGACTGTCCTTCTTTTGAGCCTATTCACTTTCTTCCGGAAAATCCCAATGCGAGTGTCCAAGAAACTTCCTGCAGTATCATGCAATGATGATCAGAGCACATTAGAGCCACTTGCTAATACAACAACTAAGGGAGATTGCCATTCTTCACCCTCCCCAGCAAACACAGATGAAAATCTTCTTTCTTCTGTGATGAAGAGGTTAGGGGAGCTTGAAGAGAAGGTTGACACGCTACAATCAAAGCCATCTGAGATGCCTTATGAAAAAGAGGAGTTGCTAAATGCTGCTGTCTGTCGAGTAGATGCTTTGGAGGCCGAGTTAATTGCAACTAAAAAGGCTCTGTATGAAGCTCTAATGAGGCAAGAAGAACTGCTTGCTTACATTGACAGCCAAGAAGAAGCTAGGCTAAGGCAGAAGAAGAAGTTCTGCTGGTGA 1887 0.4314 MSGPLDRFARPCFEGFSGSDEKKERRSDFENSEDERRTRIGSLKKKALNASSKFKHSLKKKSSRRKSDGRVSSVSIEDVRDVEELRAVDAFRQSLIMDELLPEKHDDYHMMLRFLKARKFDIDKAKHMWADMLQWRKEFGADTIMEDFEFKEFNEVVKYYPHGYHGVDKEGRPVYIERLGKVDPNKIMQATTLDRYVKYHVQEFEKAFAIKFPACTIAAKRHIDSNTTILDVQGVGLKNFNKTARELIMRLQKIDSDNYPETLCQMFIINAGPGFRLLWNTIKSFLDPKTTSKIHVLGNKYQSKLLEIIDVSELPEFLGGTCTCADQGGCLRSDKGPWKNPEILKMILNGETRGTRQIVKVLNSEGKVIAYAKPRFPMVKSSDTSTAESGSEAEDMASPKAMKSYGHLRLTPVREEAKVVGKTSYAGTSNLSGYDEYVPMVDKAVDAGWKKQASLQMSQTSKGTSPPPETPKAPEKIHARIWVALTVLLLSLFTFFRKIPMRVSKKLPAVSCNDDQSTLEPLANTTTKGDCHSSPSPANTDENLLSSVMKRLGELEEKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEELLAYIDSQEEARLRQKKKFCW 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00514 628 MobiDBLite consensus disorder prediction 16 42 - -
Adu03g00514 628 MobiDBLite consensus disorder prediction 452 474 - -
Adu03g00514 628 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Adu03g00514 628 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Adu03g00514 628 PRINTS Cellular retinaldehyde-binding protein signature 312 321 - -
Adu03g00514 628 MobiDBLite consensus disorder prediction 1 70 - -
Adu03g00514 628 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Adu03g00514 628 MobiDBLite consensus disorder prediction 49 66 - -
Adu03g00514 628 MobiDBLite consensus disorder prediction 521 542 - -
Adu03g00514 628 Coils Coil 545 565 - -
Adu03g00514 628 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH8 3 626 - -
Adu03g00514 628 Gene3D - 140 350 IPR036865 -
Adu03g00514 628 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Adu03g00514 628 CDD SEC14 153 321 IPR001251 -
Adu03g00514 628 Gene3D - 50 139 - -
Adu03g00514 628 SUPERFAMILY CRAL/TRIO domain 152 345 IPR036865 -
Adu03g00514 628 SMART sec14_4 152 323 IPR001251 -
Adu03g00514 628 Pfam CRAL/TRIO, N-terminal domain 104 131 IPR011074 -
Adu03g00514 628 Pfam CRAL/TRIO domain 159 320 IPR001251 -
Adu03g00514 628 MobiDBLite consensus disorder prediction 452 466 - -
Adu03g00514 628 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 626 - -
Adu03g00514 628 SUPERFAMILY CRAL/TRIO N-terminal domain 82 148 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00514 Adu-Chr3 4762872 4768454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00514 87 317 Acyl Lipid Metabolism Gene Families AT5G47730 28.099 1.19e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00514 - - gmx:100785793 1031.17