LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g00493	ATGGAATCTGCATGTATGGCAATGAAAACCAATCCTCATTGCCTTCATCAAGAAAATGGATTCTTAGGTGAAAGGATCAAAGGGGGTGTCAACTACAGTCCCTGGATCATCAAAGAGAAGAAGAAGAAGATGATCAATAAGGCCAAACCTTCTGTTGTATCTTCTGTTCTTACATCAGAAACTGCAAAAGAATCTTTGACAATTCAAATGCCATCTTTTCTGAGAAGAAAAGCTGATCCAAAAAATGTAGTCTCAATCATATTGGGGGGTGGTCCTGGTGCTCAACTTTATCCACTCACAAAAAGAACAGCCACACCTGCTGTTCCTGTTGGTGGTTGCTACAGGCTTATAGACATACCAATGAGCAATTGCATCAACAGTGGCATCAACAAGATATTTGTGTTAACACAGTTCAACTCTGCATCCCTCAACCGGCACATAGCTCGCACCTACTTTGGAAATGGCATCAACTTTGGAGATGGATATGTTGAGGTTCTGGCAGCTACTCAAACAGCTGGTGAAGCTGGAAATAAGTGGTTCCAAGGAACAGCAGATGCTGTGAGGCAATTCACTTGGGTGTTCGAGGATGCTAAGCACACAAATGTTGAGAATGTTTTGATCTTGGCTGGTGATCATTTATACAGAATGGATTACATGGACCTTGTGCAGAGTCATGTAGATAGAAATGCAGATATCACAGTTTCATGTGCTGCTGTAGGAGACAGCCGCGCATCGGATTATGGGTTGGTCAAGGTTGATGGCAGAGGTAGGATCATCCATTTTTCAGAGAAACCAAAGGGTGCTGATCTGAAATCAATGCAAGTAGATACTTCTATTATGGGGTTGTCACACCAAGATGCAAAGAAATCACCATATATTGCCTCTATGGGGGTTTATGTATTCAAGACAGAGGTTTTACTCAAGCTTCTCAAATGGAGATATCCAACATCCAATGACTTTGGATCCGAAATCATTCCTGCAGCTGTCGGGGAGCACGATGTTCAAGCATATTTTTTTGGAGACTATTGGGAAGACATTGGAACAATCAAATCCTTTTATGATGCTAACATGGCTCTTACTGAAGAGAATCCAATGTTCAAATTCTATGACCCCAAGACACCTATTTACACATCTCCAAGATTCCTACCACCAACCAAGATTGATAAATGCCGGATTGTGGATGCAATCATCTCCCATGGATGTTTCCTGAGGGAATGTACTGTCCAACATTCCATTGTGGGCGAGCGATCGCGTTTGGATTATGGAGTTGAACTCCTGGACACTGTAATGATGGGAGCAGACTATTACCAAACGGAATCTGAAATAGCTGCGCTTTTGGCCGAAGGGAAGGTTCCCATTGGGATTGGAAAGAACACCAAGATTAGGAACTGCATAATTGACAAGAATGCAAGGATTGGGAAAGATGTGATCATCATGAACAAAGATGGTGTTGAAGAAGCAGATAGATCAGAAGATGGATTCTACATAAGGTCAGGAATCACCATCATAATGGAGAAGGCAACAATAGAGGATGGAACTGTCATATAA	1548	0.4205	MESACMAMKTNPHCLHQENGFLGERIKGGVNYSPWIIKEKKKKMINKAKPSVVSSVLTSETAKESLTIQMPSFLRRKADPKNVVSIILGGGPGAQLYPLTKRTATPAVPVGGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGINFGDGYVEVLAATQTAGEAGNKWFQGTADAVRQFTWVFEDAKHTNVENVLILAGDHLYRMDYMDLVQSHVDRNADITVSCAAVGDSRASDYGLVKVDGRGRIIHFSEKPKGADLKSMQVDTSIMGLSHQDAKKSPYIASMGVYVFKTEVLLKLLKWRYPTSNDFGSEIIPAAVGEHDVQAYFFGDYWEDIGTIKSFYDANMALTEENPMFKFYDPKTPIYTSPRFLPPTKIDKCRIVDAIISHGCFLRECTVQHSIVGERSRLDYGVELLDTVMMGADYYQTESEIAALLAEGKVPIGIGKNTKIRNCIIDKNARIGKDVIIMNKDGVEEADRSEDGFYIRSGITIIMEKATIEDGTVI	515

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g00493	515	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	81	476	IPR029044	-
	Adu03g00493	515	SUPERFAMILY	Trimeric LpxA-like enzymes	377	515	IPR011004	-
	Adu03g00493	515	ProSitePatterns	ADP-glucose pyrophosphorylase signature 3.	294	304	IPR005836	GO:0005978\|GO:0008878
	Adu03g00493	515	TIGRFAM	glgC: glucose-1-phosphate adenylyltransferase	83	479	IPR011831	GO:0005978\|GO:0008878
	Adu03g00493	515	ProSitePatterns	ADP-glucose pyrophosphorylase signature 2.	179	187	IPR005836	GO:0005978\|GO:0008878
	Adu03g00493	515	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	1	515	IPR011831	GO:0005978\|GO:0008878
	Adu03g00493	515	Pfam	Nucleotidyl transferase	85	361	IPR005835	GO:0009058\|GO:0016779
	Adu03g00493	515	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE	1	515	-	-
	Adu03g00493	515	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	69	380	IPR029044	-
	Adu03g00493	515	CDD	ADP_Glucose_PP	86	346	-	-
	Adu03g00493	515	Gene3D	Hexapeptide repeat proteins	381	515	-	-
	Adu03g00493	515	CDD	LbH_G1P_AT_C	383	509	-	-
	Adu03g00493	515	ProSitePatterns	ADP-glucose pyrophosphorylase signature 1.	89	108	IPR005836	GO:0005978\|GO:0008878

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g00493	Adu-Chr3	4501385	4505303	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g00493	K00975		-	gmx:100808791	909.827

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu03g00493	03	4501385	4505303	Adu03g00493	03	4501385	4505303	ECH