Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00468 ATGCCTTCCAGAAGAAGAACTCTATTGAAGGTCATCATTCTCGGTGACAGCGGGGTAGGGAAGACATCTTTGATGAATCAATATATTTGGGATACAGCTGGTCAGGAAAGATTCCAAAGCCTAGGAGTTGCTTTCTACCGTGGGGCTGATTGCTGTGTTCTTGTATATGATGTTAATTCAATGAAATCATTCGACAACCTTAACAACTGGAGGGAGGAATTTCTGATTCAGGCTAGTCCTTCCGATCCAGAGAATTTTCCTTTTGTTGTTATAGGAAACAAGGTAGATATTGATGGTGGAAACAGTAGAGTGGTTTCGGAAAAGAAGGCTCGGGCTTGGTGTGCATCAAAAGGAAATATCCCATATTTTGAGACATCTGCCAAGGAAGGTATTAACGTTGAAGAAGCATTCCAGTGCATAGCCAAGAATGCCCTGAAAAGTGGGGAAGAAGAGGAATTATACCTACCCGACACAATTGATGTTGGAACCAGCAGTCAGCAACGGACAACAGGCTTGCACGGCTAA 525 0.4324 MPSRRRTLLKVIILGDSGVGKTSLMNQYIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVIGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEELYLPDTIDVGTSSQQRTTGLHG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00468 174 Pfam Ras family 29 145 IPR001806 GO:0003924|GO:0005525
Adu03g00468 174 SMART rab_sub_5 9 147 - -
Adu03g00468 174 SMART ras_sub_4 6 147 - -
Adu03g00468 174 Gene3D - 29 155 IPR027417 -
Adu03g00468 174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 145 IPR027417 -
Adu03g00468 174 CDD Rab7 9 150 - -
Adu03g00468 174 PRINTS Transforming protein P21 ras signature 122 144 - -
Adu03g00468 174 PRINTS Transforming protein P21 ras signature 84 97 - -
Adu03g00468 174 PRINTS Transforming protein P21 ras signature 18 40 - -
Adu03g00468 174 ProSiteProfiles small GTPase Ras family profile. 1 174 IPR001806 GO:0003924|GO:0005525
Adu03g00468 174 SMART rho_sub_3 11 147 IPR001806 GO:0003924|GO:0005525
Adu03g00468 174 Gene3D - 3 28 IPR027417 -
Adu03g00468 174 TIGRFAM small_GTP: small GTP-binding protein domain 29 140 IPR005225 GO:0005525
Adu03g00468 174 PANTHER RAB FAMILY 1 29 - -
Adu03g00468 174 PANTHER RAB FAMILY 29 172 - -
Adu03g00468 174 ProSiteProfiles small GTPase Rab1 family profile. 1 174 - -
Adu03g00468 174 PANTHER BNAA01G26470D PROTEIN 1 29 - -
Adu03g00468 174 PANTHER BNAA01G26470D PROTEIN 29 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00468 Adu-Chr3 4274472 4277660 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00468 K07897 - pop:7464034 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00468 03 4274472 4277660 Adu03g00468 03 4274472 4277660 ECH