Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00444 ATGGCAGTTCTTAAATCTGTAGGTGCAGATTTTGACGAAAAGCATCATGCTTTAGCTCCATTGAGGGTTTTAAGGGGCCTGATCTGTTTGTTGGTGCTGTTTTCAACAGCATTTGTAATGTTAGTCTTCTTTGGCTTCAATGGTGCTGTTATAGTTCGACTTTTTAGCATGAATTACAGCAGAAGAGCAACTTCCTTTTTCTTTGGTGCATGGTTAGCTTTGTGGCCTTTTCTGTTTGAAAAGATCAACAAGACTAAAGTTGTGTTTTCTGGAGATATTGTTCCTTCTAGAGAAAGAATCTTGCTGATTGCAAATCATAGAACCGAGGTTGACTGGATGTATTTATGGGACCTTGCATTGCGGAAAGGATGTGTCGGATACATAAGATATATACTTAAGAGCAGCTTGATGAAACTTCCGGTTTTTGGTTGGGCATTTCACATATTAGAGTTCATTCCGGTGGAAAGGAAGTGGGAGGCTGATGAATCAACCTTGCACCGTATGCTTTCAACATTCAAGGATCCCCAAGATCCTCTTTGGCTTGCTCTTTTCCCGGAAGGCACCGATTTTACTGAGCAGAAGTGTATTCGGAGTCAAAAGTATGCTGTGGAACATGGGTTACCGATTCTGAAAAATGTTTTACTTCCAAAGACAAAGGGCTTCTGCACCTGCTTGCGAGAGTTGAGAGGTTCTCTGACTGCAGTTTATGACGTGACCATTGGCTACAAATACCGCTGCCCAACTTTCTTGGACAATGTCTTTGGGGTGGAACCTTCAGAAGTTCATATGCACATCCGCCGATTTCCCCTTGATTGCATACCGGAATCTGAACAGGAAATTTCCATGTGGTTGGTAGATAGATTCAAAGTAAAGGACCATCTGCTTGCGAATTTTCAATCTCAAGGTCAGTTTCCTGATCAAGCAACCGAATTGGACTTGCCTACTGCAAAAAGCTTTCTGAATTGTATCACAGTTATTATGGTGACCGGCACATGCATATACTACACTTTCTCCTGTGTCTGGTTCAAACTCTATGTGTCTTTAGTCTGCGCTTATTTGATTCCGGCAACATCTTTCAATATTCGGCCTCAACCGATTCTCAGCTTTCTGAAGACGAGATCTAAATGTCACCCTTAG 1137 0.4204 MAVLKSVGADFDEKHHALAPLRVLRGLICLLVLFSTAFVMLVFFGFNGAVIVRLFSMNYSRRATSFFFGAWLALWPFLFEKINKTKVVFSGDIVPSRERILLIANHRTEVDWMYLWDLALRKGCVGYIRYILKSSLMKLPVFGWAFHILEFIPVERKWEADESTLHRMLSTFKDPQDPLWLALFPEGTDFTEQKCIRSQKYAVEHGLPILKNVLLPKTKGFCTCLRELRGSLTAVYDVTIGYKYRCPTFLDNVFGVEPSEVHMHIRRFPLDCIPESEQEISMWLVDRFKVKDHLLANFQSQGQFPDQATELDLPTAKSFLNCITVIMVTGTCIYYTFSCVWFKLYVSLVCAYLIPATSFNIRPQPILSFLKTRSKCHP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00444 378 CDD LPLAT_LCLAT1-like 76 266 - -
Adu03g00444 378 Pfam Acyltransferase C-terminus 254 323 IPR032098 -
Adu03g00444 378 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 30 241 - -
Adu03g00444 378 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 1 372 - -
Adu03g00444 378 Pfam Acyltransferase 91 243 IPR002123 GO:0016746
Adu03g00444 378 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 372 - -
Adu03g00444 378 SMART plsc_2 100 214 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00444 Adu-Chr3 4011307 4014486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00444 1 365 Miscellaneous Gene Families AT1G75020 59.511 1.85e-156 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00444 K13513 - gmx:100814885 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00444 03 4011307 4014486 Adu03g00444 03 4011307 4014486 ECH
Adu03g00444 03 4011307 4014486 Adu01g00971 01 13828111 13836414 ECH