Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00443 ATGGAGATCGATTTCAATGAGTATCAGTTGCGCTGTGAACTCCGTGGCCACGAAGACGACGTTCGTGGAATATGCGTTTGCGGCAACGAGCGCATAGCGACGTCGTCGAGGGACAAAACCGTTAGGCTTTGGTCTCAGGACCCTTCTGAGAAACGCAAGTTCGTGTCTTCGAAGATTCTTTTGGGTCACACCAGCTTCGTTGGACCAATTGCATGGATTCCTCCCAACGACGAGTTCACGGAAGGTGGGGTTGTGTCAGGTGGAATGGACACACTCGTTTTTGTTTGGGACTTGAAGAGTGGCGAGAAGGTTCAAACCCTCAAAGGCCATTCTTTGCAGGTCACTAGCATTACATTGGATAATGGGGATATTGTTTCATCTTCTGTTGATTGTACCTTGAGACGGTGGAGAAATGGGCAATCTGTAGAGACATGGGAGGCTCATAAGGCACCTATCCAAGCTGTTATAAAGTTACCTTCAGGCGAGCTTGTTACAGGTTCAAGTGACACAACTTTGAAGCTTTGGAGAGGAAAAACTTGTTTACATACTTTCAATGGACATGCAGATACAGTAAGAGGATTGGCTGTGATGGCTGGCCTTGGGGTCCTATCCTCATCACATGATGGTTCTCTCAGATTATGGGCAGTAAGTGGTCAAGTGTTAATGGAGATGGTTGGCCATACTGCAATTGTTTATTCAGTTGATTCACACGCATCTGGACTTATCGTCAGTGGTAATGGAGTTTGTGTTCAGAGCATAGAGCATCCTGGTTGTGTTTGGGATGCAAAGTTCATGGAAAATGGGGATATTGTGACAGCGTGTTCGGATGGAGTTGTACGCATTTGGACAGTTCATCCAGATAATATTGCTGACCAGCTTGAGCGTGATTTATACGCTTCTGAACTTTCTCAATACAAGACTAGTAGAAAAAGGGTTGGTGGATTGAAATTGGAAGAGTTACCCGGCTTGGAGGCACTGAAGATCCCAGGTACTAGTGATGGCCAGACAAAAGTAGTCAGAGAGGGGGATAATGGGGTGGCATATGCTTGGAACATGCCAGAACAGAAGTGGGATAAAATTGGTGAAGTTGTTGATGGACCGGAGGAATCAGGTCGCGCTTTCCACGATGGTGTTCAGTATGACTATGTATTTGATGTCGACATTGGAGATGGTATGCCTATCCGCAAGTTGCCATACAATCGATCAGATAATCCCTATGATGTTGCTGACAAATGGCTACTCAAGGAGAACCTTCCTCTTTCCTTCCGTGAACAAATTGTACAGTTCATACTTCAAAATACCGGACAAAAGGATATTACCTTTGATGCTTCATTTCGTGATCCTTACACTGGTGCCAATGCTTATGTACCAGGACAACCTTCACGAACATCTGATGCTTCTGCGAAACCTACTTTCAAGCATATTCCTAAGAAAGGGATGCTTGGTTTTGATACAGCTCAGTTTGATGGGATCCTCAAAAAGATAACTGAATTCAACAGTGCTTTACAATCTGACCAGGAAAAGCAGAACTTGTCTTTGACTGAACTCGATGTTTCCAGACTGGGTGCCATTGTGAAAATTCTGAAAGATACTTCACATTATCATTCTAGTAAATTTGCGGATGCTGATATATCCTTGTTGCTGAACTTGCTTCGGTCATGGCCAATTTCAATGATATTTCCTGTCATTGATCTTGTAAGGATGATAGTTCTTCATCCAGATGGGGCTACTATGCTTCACAAGCATTTTCAAGCTGAAAATGATATATTAATGGAAGTGATTAAAAAAGTCACTTCAAATTCATCAATTCCTGCAAATCTGTTGATCAGCATTCGTACTGTTACTAATCTTTTCAAGAATTCATGCTACTATGGCTGGTTGCAGAAACATCGCAGTGAGGTTCTTGATGCTTTCTCGAGTTGTAGTTCATCTCCTAACAAAAACTTGCAATTGTCCTATTCTACCTTGATACTCAATTATGCTGTTCTGTTAATTGAATCGAAAGATCAAGAAGGTCAATATCAAGTCTTATCAGCAGCACTTGAGATTGCTGAGGAAGAAAATGTAGAAGTTGATTCCAAATTCCGTGCTTTAGTTGCTGTTGGATCACTGATGCTTGAAGGTCTTGTTAAAAAGGCAGCGCTGGACTTCGATGTATTGAGCATTGCAAAAGCAGCAAAGGCTTCTAAGGAAGCCAAGCTTGCTGAAATTGGATCCGACATCGAGCTAGTAGCAAAGCAGAGTTGA 2247 0.4286 MEIDFNEYQLRCELRGHEDDVRGICVCGNERIATSSRDKTVRLWSQDPSEKRKFVSSKILLGHTSFVGPIAWIPPNDEFTEGGVVSGGMDTLVFVWDLKSGEKVQTLKGHSLQVTSITLDNGDIVSSSVDCTLRRWRNGQSVETWEAHKAPIQAVIKLPSGELVTGSSDTTLKLWRGKTCLHTFNGHADTVRGLAVMAGLGVLSSSHDGSLRLWAVSGQVLMEMVGHTAIVYSVDSHASGLIVSGNGVCVQSIEHPGCVWDAKFMENGDIVTACSDGVVRIWTVHPDNIADQLERDLYASELSQYKTSRKRVGGLKLEELPGLEALKIPGTSDGQTKVVREGDNGVAYAWNMPEQKWDKIGEVVDGPEESGRAFHDGVQYDYVFDVDIGDGMPIRKLPYNRSDNPYDVADKWLLKENLPLSFREQIVQFILQNTGQKDITFDASFRDPYTGANAYVPGQPSRTSDASAKPTFKHIPKKGMLGFDTAQFDGILKKITEFNSALQSDQEKQNLSLTELDVSRLGAIVKILKDTSHYHSSKFADADISLLLNLLRSWPISMIFPVIDLVRMIVLHPDGATMLHKHFQAENDILMEVIKKVTSNSSIPANLLISIRTVTNLFKNSCYYGWLQKHRSEVLDAFSSCSSSPNKNLQLSYSTLILNYAVLLIESKDQEGQYQVLSAALEIAEEENVEVDSKFRALVAVGSLMLEGLVKKAALDFDVLSIAKAAKASKEAKLAEIGSDIELVAKQS 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00443 748 Pfam WD domain, G-beta repeat 179 214 IPR001680 GO:0005515
Adu03g00443 748 Pfam WD domain, G-beta repeat 248 282 IPR001680 GO:0005515
Adu03g00443 748 Pfam WD domain, G-beta repeat 140 175 IPR001680 GO:0005515
Adu03g00443 748 Pfam WD domain, G-beta repeat 12 45 IPR001680 GO:0005515
Adu03g00443 748 Pfam WD domain, G-beta repeat 101 136 IPR001680 GO:0005515
Adu03g00443 748 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 14 45 - -
Adu03g00443 748 ProSiteProfiles Trp-Asp (WD) repeats profile. 184 214 IPR001680 GO:0005515
Adu03g00443 748 ProSiteProfiles Trp-Asp (WD) repeats profile. 145 175 IPR001680 GO:0005515
Adu03g00443 748 ProSitePatterns Trp-Asp (WD) repeats signature. 84 98 IPR019775 -
Adu03g00443 748 Gene3D - 367 442 IPR038122 -
Adu03g00443 748 PANTHER PHOSPHOLIPASE A-2-ACTIVATING PROTEIN 4 744 - -
Adu03g00443 748 Pfam PFU (PLAA family ubiquitin binding) 329 437 IPR015155 -
Adu03g00443 748 SMART WD40_4 7 45 IPR001680 GO:0005515
Adu03g00443 748 SMART WD40_4 138 176 IPR001680 GO:0005515
Adu03g00443 748 SMART WD40_4 177 215 IPR001680 GO:0005515
Adu03g00443 748 SMART WD40_4 100 137 IPR001680 GO:0005515
Adu03g00443 748 SMART WD40_4 246 283 IPR001680 GO:0005515
Adu03g00443 748 SMART WD40_4 53 97 IPR001680 GO:0005515
Adu03g00443 748 Pfam PUL domain 475 740 IPR013535 -
Adu03g00443 748 ProSiteProfiles Trp-Asp (WD) repeats profile. 14 45 IPR001680 GO:0005515
Adu03g00443 748 PANTHER PHOSPHOLIPASE A2-ACTIVATING PROTEIN 4 744 - -
Adu03g00443 748 Coils Coil 667 687 - -
Adu03g00443 748 ProSiteProfiles PUL domain profile. 473 744 IPR013535 -
Adu03g00443 748 ProSiteProfiles Trp-Asp (WD) repeats profile. 60 106 IPR001680 GO:0005515
Adu03g00443 748 Gene3D - 473 744 IPR011989 -
Adu03g00443 748 ProSiteProfiles PFU domain profile. 349 444 IPR015155 -
Adu03g00443 748 Gene3D - 4 299 IPR015943 GO:0005515
Adu03g00443 748 SUPERFAMILY WD40 repeat-like 5 294 IPR036322 GO:0005515
Adu03g00443 748 CDD WD40 10 282 - -
Adu03g00443 748 PRINTS G protein beta WD-40 repeat signature 32 46 IPR020472 -
Adu03g00443 748 PRINTS G protein beta WD-40 repeat signature 202 216 IPR020472 -
Adu03g00443 748 PRINTS G protein beta WD-40 repeat signature 163 177 IPR020472 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00443 1 747 Acyl Lipid Metabolism Gene Families AT3G18860 71.504 0.0 1167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00443 K14018 - gmx:100816481 1306.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00443 03 4001083 4008703 Adu03g00443 03 4001083 4008703 ECH