Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00442 ATGAAGACACTCAGTCCCTTAAACTCCTCGAATCCATGTCTCCTCAAGACCCATTTCCTCAAAGTTCCCATCTTTAACCCCATTTTCAAGTTCAAGCCATTGCCACACAACACCCACCATGCAAGGATAGCCAAAGTTCCCTCATTTACCATAAACTCTAAGCTAAAAAGCTCTCAGGATATCAATAACACAGGGAAGAAGAGCGTTTCCCAGAAGATTGTGCTATCAGAAACTTCGCCTCCTCCACTTGCAGTTGATAAAGATGACATCAATGGTGGCAGTGGCAGTGAGAGTGTCCCAGTTAGCTCAAAGAAAAAAGGAGGGGTTTCTGGGTTGGCCAAGAAGTTGAGCAAAAAGGTGTTGCAGATTCTCTCTAATTTGTCTTTGGCTATTGGAGAAATGTTCACCATTGCAGCTTTAATGGCTTTAGGAACTGTTATTGAACAAGGTGAGGCCCCTGATTTTTACTTCAAAAATTACCCTGAAGATCATCCTGTGTTGGGTTTTTTTACATGGAGATGGGTTCTCACCCTTGGCTTTGATCACATGTTTACATCCCCTGTATTCATTGGAATGTTGGCTCTCCTTGGTGCATCTCTGATGGCCTGCACTTACACGACACAGATTCCGCTCGTCAAGGTTTCGAGAAGATGGGCATTTTTGCATTCTGCTGAGGCTATTCGTAAGCAAGAATTTTCAGATACGTTGACAAGAGCATCAATTGAAGATGTTGGTACTCTATTGATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCATGTTTATATGCTTTTCAAGGGCTTGCCGGTCGGCTGGCCCCTATAGGAGTCCATATATCACTGCTGCTGATAATGGTTGGAGGAACTCTAAGTGCTGCTGGGAGCTTCAAAGGTTCAGTCACGGTGCCGCAAGGGCTGAATTTTGTTGTAGGAGATGTTCTTGGTCCTACTGGTTTTCTGTCCACTCCCACTGAAGCTTTTAATACAGAGATTCATGTCAACAGATTTTACATGGATTATTTTGAAAGTGGAGAGGTTTCGCAGTTCCACACTGATCTTTCCCTCCTTGACATGGATGGGAAAGAAGTAATGAGAAAAACAATTAGTGTAAATGATCCTTTAAGATATGGTGGCATCACTATATATCAGACAGATTGGAGTATTTCAGCACTTCAAATTCTTAAGGACAATGAAGGACCTTATAACTTGGCTATGGCTCCTCTACAGATCAATGGGGACAAGAAACTTTTTGGAACTTTCCTACCTGTTGGAGATATCAACTCTCCTGATGTTAAGGGAATATCTATGCTTGCACGTGATCTGCAGTCAATTGTCCTTTATGATAAGGAAGGGAAATTTGCAGGAGTTAGAAGGCCTAATTCAAAGCTCCCAATCAATATTGATGGCTCAGAAATTGTGATTCTTGATGCAATAGGGAGCAGTGGCTTGGACTTGAAGACTGACCCTGGAGTTCCAACTGTTTATGCTGGATTTGGTGCTCTCATGCTCACTACTTGCATCAGCTACTTATCTCATTCACAGATATGGGCCATACAAGATGGAACAAGTGTGATTATTGGAGGGAAGACTAATAGAGCAAAGATGGAGTTCCCTGAAGAGATGAACCGTTTGCTTGATAAGGTTCCTGAAATAGTTGAATCTTCTTCATCTCAGCAAGTTGACACCATTACTAGTGGCTAG 1701 0.425 MKTLSPLNSSNPCLLKTHFLKVPIFNPIFKFKPLPHNTHHARIAKVPSFTINSKLKSSQDINNTGKKSVSQKIVLSETSPPPLAVDKDDINGGSGSESVPVSSKKKGGVSGLAKKLSKKVLQILSNLSLAIGEMFTIAALMALGTVIEQGEAPDFYFKNYPEDHPVLGFFTWRWVLTLGFDHMFTSPVFIGMLALLGASLMACTYTTQIPLVKVSRRWAFLHSAEAIRKQEFSDTLTRASIEDVGTLLMGAGYEVFLKGPCLYAFQGLAGRLAPIGVHISLLLIMVGGTLSAAGSFKGSVTVPQGLNFVVGDVLGPTGFLSTPTEAFNTEIHVNRFYMDYFESGEVSQFHTDLSLLDMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLQINGDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVILDAIGSSGLDLKTDPGVPTVYAGFGALMLTTCISYLSHSQIWAIQDGTSVIIGGKTNRAKMEFPEEMNRLLDKVPEIVESSSSQQVDTITSG 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00442 566 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 117 546 IPR023494 -
Adu03g00442 566 MobiDBLite consensus disorder prediction 79 108 - -
Adu03g00442 566 Pfam ResB-like family 429 541 IPR007816 -
Adu03g00442 566 Pfam ResB-like family 128 393 IPR007816 -
Adu03g00442 566 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 81 556 IPR023494 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00442 11 557 Miscellaneous Gene Families AT1G49380 67.031 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00442 K07399 - gmx:100807003 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00442 03 3995175 3999908 Adu03g00442 03 3995175 3999908 ECH