Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00441 ATGGCTCTTTCTGCGCACCTCTGTTGTCGTCTCCCCACAACTCGCACCGACCTCGCCTTGCCGGAGACCTTTGCCAGGCTCCGATGCCGGAAGCCTCACTCTCTCTCCGTCCGATGCAGCTCCGGCGAGTCTTCCGTCGCCGTTGACAACTCCGAGGACTTCGATGCCAAGGTCTTCAGGCATAATTTGACTCGTAGCAAGAATTATAATCGCAGAGGGTTTGGTCACAAGGAAGAGACCCTCAAGCTCATGAATCGTGAATACACAAGTGACATAATTAAGACTTTGAAGGAAAATGGTTATGAGTATACATGGGGCACTGTCACAGTGAGGCTGGCTGAAGCCTATGGCTTCTGCTGGGGAGTTGAGAGGGCTGTTCAAATCGCGTACGAGGCGAGAAAGCAGTTTCCTACTGAGAATATATGGCTTACCAATGAGATCATCCACAACCCAACTGTTAATAAGAGATTACAAGAGATGAAGGTGCAGGATATTCCTATTTTGGAAGGAGAAAAACAATTTGAGGTTGTTAACAAGGGTGATGTAGTCATATTGCCTGCTTTCGGAGCAGCAGTGGATGAGATGTTGACTTTGAGTGAGAAAAATGTTCAAATTGTTGATACAACTTGCCCATGGGTTTCAAAGGTGTGGACTTCTGTTGAAAAGCACAAGAAAAAGGATTATACCTCAATAATCCATGGTAAATATGCGCATGAGGAAACTGTAGCAACTGCATCTTTCGCTGGAAAGTACATTATTGTGAAGAATATGAAAGAGGCAGAGTATGTTTGTGACTATATTCTTGGTGGTAAGTTAAATGGATCGAGCTCAACCAGAGAAGCATTTTTAGAGAAATTTAAATATGCCATTTCCGAGGGCTTTGATCCAGACAAGGACCTTGAACAAGTTGGCATTGCAAATCAGACTACAATGCTCAAGGGAGAGACCGAAGAGATAGGGAAACTAGTAGAGAGAACTATGATGCAAAAATTTGGTGTAGAAAACATCAATGAGCACTTCATGAGCTTCAACACGATTTGTGATGCCACTCAGGAACGACAAGATGCTATGTATAAGCTGGTGGAACAAGATATGGATCTTATGCTAGTCGTTGGTGGGTGGAACTCAAGCAACACATCACACTTGCAAGAGATTGCTGAGGAACGCGGAATTCCTTCTTACTGGATCGACAGCGAGCAAAGAATTGGTCCAGGAAACAAGATAGCACACAAGTTGATGCATGGTGAACTGGTGGAGAAAGAAAACTTTCTGCCAAAGGGTCCAATAACGATTGGCGTTACATCTGGTGCATCCACACCAGACAAGGTTGTGGAAGATGTGCTTGTCAAGGTGTTTGACTTGAAACGGGAAGAAGCAATGCAACTCGCTTAG 1392 0.4461 MALSAHLCCRLPTTRTDLALPETFARLRCRKPHSLSVRCSSGESSVAVDNSEDFDAKVFRHNLTRSKNYNRRGFGHKEETLKLMNREYTSDIIKTLKENGYEYTWGTVTVRLAEAYGFCWGVERAVQIAYEARKQFPTENIWLTNEIIHNPTVNKRLQEMKVQDIPILEGEKQFEVVNKGDVVILPAFGAAVDEMLTLSEKNVQIVDTTCPWVSKVWTSVEKHKKKDYTSIIHGKYAHEETVATASFAGKYIIVKNMKEAEYVCDYILGGKLNGSSSTREAFLEKFKYAISEGFDPDKDLEQVGIANQTTMLKGETEEIGKLVERTMMQKFGVENINEHFMSFNTICDATQERQDAMYKLVEQDMDLMLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNKIAHKLMHGELVEKENFLPKGPITIGVTSGASTPDKVVEDVLVKVFDLKREEAMQLA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00441 463 CDD lytB_ispH 110 451 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Adu03g00441 463 Hamap 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 108 455 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Adu03g00441 463 Gene3D - 331 463 - -
Adu03g00441 463 PANTHER 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE, CHLOROPLASTIC 4 461 - -
Adu03g00441 463 Gene3D - 211 330 - -
Adu03g00441 463 Gene3D - 119 209 - -
Adu03g00441 463 TIGRFAM ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 110 450 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Adu03g00441 463 Pfam LytB protein 110 450 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00441 K03527 - gmx:100818067 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00441 03 3991629 3995051 Adu03g00441 03 3991629 3995051 ECH