Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00435 ATGAGGCATTTGAGAGTGAGAGATGCTCTGGTGTACCATGATCATGTCCTTGCTATAAAATCTGGTTTGGCATCAAGCATTTTTACTTGTAATCAACTCATTCACAGGTACTCGAACCATGGCTTTGTTCAAGAGGCACAGAAAGTGTTCGATGGAATGCATCAACGAAATGAATTCTCTTGGAATGCCATTATTATGGCCTACATAAAAGCACACAATTTGCCTCGAGCACGATCACTTTTCGATTCTGCCTCCCACAAGGACTTGGTTGCTTACAATTCCATGTTGTCGGCTTATGTCGGCGCTGATGGTTATGAAACCGAGGCACTTGATTTCTTTGCTGCAATGCAATCTGCGCGCGACACGGTTGGGATTGATGAGATCACTTTGACAACCATGCTTAACTTGACTGCCAAGCTAGGCATGGGGTACCATGGGAAGCAAATACATTCATACATGGTGAAAACTGCAAATGATTCAAGCAAGTTTGCAACAAGCTCTCTTATTGACATGTACTCTAAATGTGGTTCTTTTCACGAAGCATGCAACGTGTTTAGTGGTTGTGATGGGATGGTGGATTTGGTTTCAAAGAATGCAATGATTGCAGCTTGTTGTAGGGAACGAGAGATGGACATGGCTTTGAATTTGTTTTGGAAAAATCATGAATTAAATAACATTGTATCCTGGAATACGTTGCTTGTAGGATATGCTCAGAATGGCTATATGGAGAAGGCACTTGCCTTGTTTGCCGAGATGATTGAAAATGGTATCGGCTGCGATGAACACACTTTGGCTAGTGTTTTGAGTACCTGCTCTGGTTTAAAGTGCTTGAAATTAGGCAACTGTGTTCATGCTTGGGTGTTGAGAAATGGTTGCATTTCAAATCAATTTATTAGCAGTGGCATTGTTGATCTCTACTGTAGGTGTGGGAATATTAGATGTGCGGAGTTAGTCCATGCAGGAATTGGGATTGAGAATCCATTTGCAGTTTCTTCATTGATTACATGCTACTCATCTCAAGGTAACATGATAGAAGCTCAAAGGCTCTTCAATTCACTTACAGAAAGAAGTTATGTTGCCTGGACAGCTTTATTTTCAGGTTATGTCAAATCACAACAATGCGAGGCAGTCTTCAAACTCTTCAGAGAGTATATATCTACAAAAGCTCTAGTTCCTCAAGCGATGATCATTATTCGCGTGCTTGGCGCATGTACAATGCAAGCAGCCCTTAGTTTGGGAAGGCAGATTCATGCTTACATCTTGAGAATGAAATTCCTCATGGATGAGAAATTGCTGGGTGCTTTGGTTGATATGTACTCAAAATGTGGGAATATTATGCATGCTGAGAAAATCTTTAGACTAGTTAACAATAGCAACAGAGATGCAATCTCGTATAATATTATGATAGCTGGTTATGCTCACCATGGGCTTGAAAATAAAGCTATTCAGCTTTTTGAGGAGATGTCGAAGAAAAGTGTCAAGCCTGATGCAATTACTTTTGTTGCACTCCTTTCGGCTTGTCGGCATCGGGGATTAGTAGAACTAGGAGAAAATATTTTCATTTCCATGGAAGAAGAGTACAATGTAGTGCCTGATAATTACCACTATGCATGTATTGTTGATATGTATGGAAGGGCTAATCAACTAGAAAAGGCAGTAGAATTTATTAGGAAGATCCCTATACAGATAGATGCTACAATCTGGGGTGCATTTCTTAATGTTTGTCAAATGAGCAACAATACAGACCTTGTCAAACAGGCAGAAGAGAAACTGTTAAAGATTGATGTCGATAATGGGTCTCGGTATGTGCAATTGGCCAATCTTTATGCTGCCAAAGGGAAATGGGATGAGAAGGGAAGAATAAGAGAGAAAATGAGAGAAAAAGAGGCTAAGAAGGTTGCTGGTTGCAGTTGGATATATGTGGCAGATGGTATTCATGTATTCACTTCTGGTGATGCATCTCATACAAAAGGAGATGCAATATATGCAACTTGA 1995 0.4025 MRHLRVRDALVYHDHVLAIKSGLASSIFTCNQLIHRYSNHGFVQEAQKVFDGMHQRNEFSWNAIIMAYIKAHNLPRARSLFDSASHKDLVAYNSMLSAYVGADGYETEALDFFAAMQSARDTVGIDEITLTTMLNLTAKLGMGYHGKQIHSYMVKTANDSSKFATSSLIDMYSKCGSFHEACNVFSGCDGMVDLVSKNAMIAACCREREMDMALNLFWKNHELNNIVSWNTLLVGYAQNGYMEKALALFAEMIENGIGCDEHTLASVLSTCSGLKCLKLGNCVHAWVLRNGCISNQFISSGIVDLYCRCGNIRCAELVHAGIGIENPFAVSSLITCYSSQGNMIEAQRLFNSLTERSYVAWTALFSGYVKSQQCEAVFKLFREYISTKALVPQAMIIIRVLGACTMQAALSLGRQIHAYILRMKFLMDEKLLGALVDMYSKCGNIMHAEKIFRLVNNSNRDAISYNIMIAGYAHHGLENKAIQLFEEMSKKSVKPDAITFVALLSACRHRGLVELGENIFISMEEEYNVVPDNYHYACIVDMYGRANQLEKAVEFIRKIPIQIDATIWGAFLNVCQMSNNTDLVKQAEEKLLKIDVDNGSRYVQLANLYAAKGKWDEKGRIREKMREKEAKKVAGCSWIYVADGIHVFTSGDASHTKGDAIYAT 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00435 664 PANTHER - 325 640 - -
Adu03g00435 664 PANTHER - 15 71 - -
Adu03g00435 664 PANTHER - 193 319 - -
Adu03g00435 664 PANTHER - 62 218 - -
Adu03g00435 664 Pfam PPR repeat 28 57 IPR002885 -
Adu03g00435 664 Pfam PPR repeat 166 185 IPR002885 -
Adu03g00435 664 Pfam PPR repeat 196 217 IPR002885 -
Adu03g00435 664 Pfam PPR repeat 330 356 IPR002885 -
Adu03g00435 664 Pfam PPR repeat 59 82 IPR002885 -
Adu03g00435 664 Pfam PPR repeat 359 383 IPR002885 -
Adu03g00435 664 Pfam PPR repeat 434 453 IPR002885 -
Adu03g00435 664 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 326 360 IPR002885 -
Adu03g00435 664 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 225 259 IPR002885 -
Adu03g00435 664 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 461 495 IPR002885 -
Adu03g00435 664 Pfam PPR repeat family 225 271 IPR002885 -
Adu03g00435 664 Pfam PPR repeat family 461 507 IPR002885 -
Adu03g00435 664 Gene3D Tetratricopeptide repeat domain 145 276 IPR011990 GO:0005515
Adu03g00435 664 Gene3D Tetratricopeptide repeat domain 13 144 IPR011990 GO:0005515
Adu03g00435 664 Gene3D Tetratricopeptide repeat domain 392 511 IPR011990 GO:0005515
Adu03g00435 664 Gene3D Tetratricopeptide repeat domain 277 391 IPR011990 GO:0005515
Adu03g00435 664 Pfam E motif 579 639 IPR046848 -
Adu03g00435 664 TIGRFAM PPR: pentatricopeptide repeat domain 463 497 IPR002885 -
Adu03g00435 664 TIGRFAM PPR: pentatricopeptide repeat domain 227 260 IPR002885 -
Adu03g00435 664 Gene3D Tetratricopeptide repeat domain 512 655 IPR011990 GO:0005515
Adu03g00435 664 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 26 60 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00435 Adu-Chr3 3959485 3961479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00435 22 662 Glycoside Hydrolase AT3G49170 29.800 5.32e-92 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00435 - - gmx:100803987 1029.62