LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g00421	ATGGCTTCTCTTCTGAAGAAACTAAGACCTGGGGTCCCTTCAGTGGTTGTTGATGATGGTGGTGGTTGTGATAGCAATTTCGAATTCTCCATTGCCGAGGAGTACAAAGGTCCTCCATTGAGTTACTTCATCCCTGAGGTACCTGCTTTCAAGCTTGACCAAATCCCAGTTGCTCCTATAGCTTCTTCTCCACCTCATCATCAATCCTCATTAGTAGTCCCAGTTATCCAACCTATCAGAAAATCAAGCAATGCTACAACGAAGCTTAAAGATGGTGGTAATGAAGATCATAAACATGGTGTTGTAGGATTGAATCTCATTTCCAAGAATTCAGATACGGCAGAAGAATCTGGATCATGTTCTGCTTCAGTATCTTCTGAGATATTTTCATGTAAAGCAGAGGATGAGGACATGGATGATCCTTCTAGTACTCCAACACATGTGAAACGCAATTCTGCTGTCAGATTTCGTGATCCCGACTCGAATGAAATGGTGGATGATGATTACAATGATGACGAAGTTTTTTCTGGTTCTGAGTATGAAAGTGGAATCAGTACTCCTATTATGAACTACGTGAGGCCAATTCATGCTGCGAGACCTGGGAAAAAAGGCACGTGCTACCGTTGCCTTAGAGGGAACCGGTTCACTCAAAGAGAGGTTTGCATTGTTTGCAGTGCAAAGTATTGCAGAAAGTGTGTGCTGAGAGCAATGGGGTCAATGCCAGAAGGAAGAAAGTGTCTCACTTGCATTGGTCAGAGGATTGATGAGATAAAGAGGAGGAACCTTGGCAATTTTTCGAGGATGCTCAAGTCCTTGCTCTCTGATTGTGAAGTGAAGCAAATCATGAATGATGAGATGTTTTGTGAAGCAAATCAGATTCCAGCAGAGCAAATTGTTGTGAATGGGGAGCGTCTTGAGAGGGACAAGCTCATGCTGCTGCTGACATGTCGAAACCCTCCAAAAGAGTTGAAACCAGGCTTCTATTGGTATGATAAATCAGCAGGACTTTGGGGAAAGGAAGGTCAACGGCCGTGTCAGATTATAAGCCCTGATATTGATGTTGGGGGTAGCTTGCAGAAAAATGCAAGTCGTGGAAAAACAAGAGTAACTGTAAATGGTCGTGAGATTACTAAAGAAGAGTTATGGATACTAAAGCTTGCAGGAGTAAAATGGGATGGACCAACTGATTTCTGGGTGACTGCTGATGGATCATATGTTGAAGTGGGACATAGGAATGTCAAGGGCCGAATATGGGATAAGTTTGGAGCAAAGGTAGCTTTGGCATTTCTGTCCCTGTCACTTCCACCTAATCTGGTGACTACTCCCAGCGAAGGTGAAGGCAAAGGCGAAGGAGTGAACGGAGGTAGCCAAGACAACAACCATCAGCAGAAAATGCTTCACAAGTTTCTACTTGTTGGTTCTGCCAAGTCAGGAACAAGTACAATATTTAAACAGGCCAAGCATCTGTATAATGTTCCTTTCTCTGAAAATGAGCGCCAAACTATCAAGTTGGTGATTCAGAGCAACTTGTTTACCTACCTTGGCATGCTGTTAGAGGGGTGTGAATATTTTGAAGAGAGGAGTTTACTGGAGAAAACGAATACAGAACATGTCGACGAATCCACTTCATCTGCCCAAGATTACAAGGTTTCTCAGATTGGCTAA	1665	0.433	MASLLKKLRPGVPSVVVDDGGGCDSNFEFSIAEEYKGPPLSYFIPEVPAFKLDQIPVAPIASSPPHHQSSLVVPVIQPIRKSSNATTKLKDGGNEDHKHGVVGLNLISKNSDTAEESGSCSASVSSEIFSCKAEDEDMDDPSSTPTHVKRNSAVRFRDPDSNEMVDDDYNDDEVFSGSEYESGISTPIMNYVRPIHAARPGKKGTCYRCLRGNRFTQREVCIVCSAKYCRKCVLRAMGSMPEGRKCLTCIGQRIDEIKRRNLGNFSRMLKSLLSDCEVKQIMNDEMFCEANQIPAEQIVVNGERLERDKLMLLLTCRNPPKELKPGFYWYDKSAGLWGKEGQRPCQIISPDIDVGGSLQKNASRGKTRVTVNGREITKEELWILKLAGVKWDGPTDFWVTADGSYVEVGHRNVKGRIWDKFGAKVALAFLSLSLPPNLVTTPSEGEGKGEGVNGGSQDNNHQQKMLHKFLLVGSAKSGTSTIFKQAKHLYNVPFSENERQTIKLVIQSNLFTYLGMLLEGCEYFEERSLLEKTNTEHVDESTSSAQDYKVSQIG	554

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g00421	554	Gene3D	-	468	500	IPR027417	-
	Adu03g00421	554	PANTHER	EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2	19	547	-	-
	Adu03g00421	554	PANTHER	GTP-BINDING PROTEIN ALPHA SUBUNIT	19	547	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Adu03g00421	554	MobiDBLite	consensus disorder prediction	133	171	-	-
	Adu03g00421	554	Gene3D	-	501	545	IPR011025	GO:0007165
	Adu03g00421	554	SUPERFAMILY	FYVE/PHD zinc finger	201	253	IPR011011	-
	Adu03g00421	554	MobiDBLite	consensus disorder prediction	533	554	-	-
	Adu03g00421	554	MobiDBLite	consensus disorder prediction	539	554	-	-
	Adu03g00421	554	MobiDBLite	consensus disorder prediction	440	459	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g00421	Adu-Chr3	3853173	3857677	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g00421	-		-	ahf:112788912	1082.78