Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00368 ATGTTGGTCTTTTCGGTTACACCTCGATCCTTTGGTTTGGGGCGAATCAAAGTCTCGTTTTTGATGACTCAAACAACGCCATCTCTTCCCTCCAATTCCAACACCGACACACCCACCTCGGACTCCTCCTCGCACGCTGCTTCTGTGTCCAAAGCTCGTGTCTTTGTGAGGAGAAGCAAGAGGCCCAAAACCACTCTTGTGGCACTTCAACAAAAGGAGCTTGAGCCCCCAACACGTGATCATGACAAAAGTTCTGGCCTTCCTGAAATTGAAGACTTTGCATACAGTGGAGCAAATAATGCATTTACTCAATCCAGTAAATCAGAATTGGGCTTGGACGCGACTCTTGTGGAAAGTGAAGCTACTTCACCTAGACACAGTGGTGAATTACCTGCACACTGGGAAAGGGTGCTTGAGGGGATTCGCAGAATGAGGTGTTCTGCAGAAGCACCGGTAGACACTATGGGATGTGAGAAAGCTGGCGATACTCTACCTCCTAAGGAAAGAAGATTTGCTGTCCTAGTTTCTTCTCTTTTGTCAAGCCAAACCAAAGATCATGTTACTCATGGAGCAATCCAACGTCTTCTTGAAAATGGCCTACTTACCCCTGACGCAATCAACAATGCTGATGAAGAAACCATAAAAAAGATGCTTTACCCTGTTGGATTCTATACAAGAAAAGCCACCAACTTGAAAAAAATCGCAAACATTTGTCTCATGAAGTATGATGGAGACATACCTAGCACAATTGAGCAATTACTCTTACTTCCAGGCATAGGTCCTAAGATGGCTCATTTGGTCATGAATGTTGGATGGAACAATGTTCAAGGAATATGTGTTGATACTCATGTCCACCGCATCTGCAATCGGCTTGGATGGGTGTCTAGACCCAGCACAAAACAGAAAACTCTAACACCTGAAGAAACAAGAGAGGCATTGCAAAGATGGCTTCCAAGGGAAGAATGGGTTCCAATAAATCCTCTTTTGGTAGGATTTGGACAAACCATTTGCACTCCCTTGAGACCTCGTTGTGGAGAATGTGGTATAAGTCATTTGTGCCCCTCAGCATTCAAGGAGGCCTCTAACTCAAGCCCATCTTCCAAGCCCAAAAAGTCTGGGCCTAACAAGAAGCGTTAG 1137 0.4512 MLVFSVTPRSFGLGRIKVSFLMTQTTPSLPSNSNTDTPTSDSSSHAASVSKARVFVRRSKRPKTTLVALQQKELEPPTRDHDKSSGLPEIEDFAYSGANNAFTQSSKSELGLDATLVESEATSPRHSGELPAHWERVLEGIRRMRCSAEAPVDTMGCEKAGDTLPPKERRFAVLVSSLLSSQTKDHVTHGAIQRLLENGLLTPDAINNADEETIKKMLYPVGFYTRKATNLKKIANICLMKYDGDIPSTIEQLLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSRPSTKQKTLTPEETREALQRWLPREEWVPINPLLVGFGQTICTPLRPRCGECGISHLCPSAFKEASNSSPSSKPKKSGPNKKR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00368 378 MobiDBLite consensus disorder prediction 25 49 - -
Adu03g00368 378 SUPERFAMILY DNA-glycosylase 142 368 IPR011257 GO:0003824|GO:0006281
Adu03g00368 378 MobiDBLite consensus disorder prediction 357 378 - -
Adu03g00368 378 Pfam Helix-hairpin-helix motif 241 269 IPR000445 GO:0003677
Adu03g00368 378 PANTHER ENDONUCLEASE III HOMOLOG 2, CHLOROPLASTIC 68 376 - -
Adu03g00368 378 Gene3D - 269 359 IPR023170 -
Adu03g00368 378 SMART ccc3 336 356 IPR003651 GO:0051539
Adu03g00368 378 CDD ENDO3c 171 333 IPR003265 GO:0006284
Adu03g00368 378 Hamap Endonuclease III-like protein 1 [NTHL1]. 130 359 IPR030841 GO:0003906|GO:0005634|GO:0006281|GO:0006285|GO:0019104
Adu03g00368 378 ProSitePatterns Endonuclease III family signature. 244 273 IPR004036 -
Adu03g00368 378 Pfam HhH-GPD superfamily base excision DNA repair protein 175 303 IPR003265 GO:0006284
Adu03g00368 378 MobiDBLite consensus disorder prediction 25 88 - -
Adu03g00368 378 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 68 376 - -
Adu03g00368 378 SMART endo3end 179 335 IPR003265 GO:0006284
Adu03g00368 378 ProSitePatterns Endonuclease III iron-sulfur binding region signature. 337 353 IPR004035 -
Adu03g00368 378 Gene3D Hypothetical protein; domain 2 157 268 - -
Adu03g00368 378 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00368 Adu-Chr3 3359789 3363958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00368 K10773 - gmx:100818398 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01142 08 20262010 20264234 Adu03g00368 03 3359789 3363958 PCT