Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00364 ATGTTGATAATGGAATCGAAGAAGGTGCATGCGCTGATTGGCGTGATTGTTAGCATTTGTGTTATTGAGAGTGAGGCCAACATTCTCGATGTTTCTTTTCTGAATCGGAGCACTTTCCCCAATGCCTTCATCTTCGGGACTGCTTCCTCCGCATACCAGTATGAAGGTGCAGCTAGGGAAGGTGGTAGAGGACCCTCTATATGGGATACTTTCACCCATAAATACCCAGGAAAAATTAAAGATGGAAGTAATGGAGATGTGGCTGATGATTCCTATCATCAGTATAAGGAAGATATTGAACTCATGAAGTATATGAATTTGGATGCTTATAGATTCTCCATTTCTTGGTCAAGAATACTCCCAAAAGGAAAGCTTAGTGGAGGTGTAAACCACAAAGGAATTGAATACTACAACAACCTCATCAACGAGCTATTGGCTAATGGTCTGCAACCATTTGTGACTATCTTTCATTGGGACGTTCCTCAGGCCTTGGAAGACGAGTATGGTGGTTTTCTAAGCCCGCACATTGCAGATGATTTTAAGGACTATGCTGAAGTTTGTTTCAAGGAATTTGGTGACAGAGTGAAACACTGGATCACTTTGAACGAACCCAAGAGTGTGAGCAAGAATGGCTATGCGAACGGTAGGTATGCACCAGGGCGGTGTTCTGATTGGCTAAAACTGAATTGCACGGGAGGTGATTCGGGGACTGAACCATATTTGGCTGCACACCACCAACTTCTTGCTCATGCTGCTGCTGCCAAGCTGTACAAGACTAAGTATCAGGTTTCTCAGAAAGGCTTGATAGGCATCACGTTAAATTCTAATTGGTTCTTGCCATACACAAACAACAATTTGGATATCCTTGCTGCTCAACGAGCTCTTGATTTCATGTTTGGATGGTTTATGGAACCAATAACAAGAGGAAAATATCCAAGATCCATGCAGCAATATGTGGGAAGCCGGTTACCAAGTTTCAGCAAAGAGCAATCTAAGCAACTTATAGCTGAGCGAAATGGGATACCCATTGGGCCAAGGGCTGCTTCAACTTGGCTATATGTATATCCAAAGGGAATTCGAGAGATATTGTTGTACACAAAGAAAACATATAACAACCCTTTAATTTACATCACAGAAAATGGTATCGATGAGTTCAATGATCCAACACTACCACTTGAAGAGGCCCTCATGGATACTTTTAGAATTGACTACTATTATCGCCACCTTTATTATGTTTCAACCGCAATCAAGGATGGAGTGAATATAAAAGGGTATTTTGCATGGTCACTATTGGACAACTTTGAATGGGGCAATGGTTACACGGTGCGTTTTGGAATTAACTTTGTTGATTATAAAGATAATTTGAAAAGGCACAAAAAGCTTTCTGCTCATTGGTTTAGGAATTTTCTTAAAAAATATTAG 1422 0.4086 MLIMESKKVHALIGVIVSICVIESEANILDVSFLNRSTFPNAFIFGTASSAYQYEGAAREGGRGPSIWDTFTHKYPGKIKDGSNGDVADDSYHQYKEDIELMKYMNLDAYRFSISWSRILPKGKLSGGVNHKGIEYYNNLINELLANGLQPFVTIFHWDVPQALEDEYGGFLSPHIADDFKDYAEVCFKEFGDRVKHWITLNEPKSVSKNGYANGRYAPGRCSDWLKLNCTGGDSGTEPYLAAHHQLLAHAAAAKLYKTKYQVSQKGLIGITLNSNWFLPYTNNNLDILAAQRALDFMFGWFMEPITRGKYPRSMQQYVGSRLPSFSKEQSKQLIAERNGIPIGPRAASTWLYVYPKGIREILLYTKKTYNNPLIYITENGIDEFNDPTLPLEEALMDTFRIDYYYRHLYYVSTAIKDGVNIKGYFAWSLLDNFEWGNGYTVRFGINFVDYKDNLKRHKKLSAHWFRNFLKKY 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00364 473 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 336 472 - -
Adu03g00364 473 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 15 334 - -
Adu03g00364 473 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 43 57 IPR033132 -
Adu03g00364 473 Gene3D Glycosidases 336 472 - -
Adu03g00364 473 PRINTS Glycosyl hydrolase family 1 signature 443 455 IPR001360 GO:0004553|GO:0005975
Adu03g00364 473 PRINTS Glycosyl hydrolase family 1 signature 398 409 IPR001360 GO:0004553|GO:0005975
Adu03g00364 473 PRINTS Glycosyl hydrolase family 1 signature 419 436 IPR001360 GO:0004553|GO:0005975
Adu03g00364 473 PRINTS Glycosyl hydrolase family 1 signature 375 383 IPR001360 GO:0004553|GO:0005975
Adu03g00364 473 PRINTS Glycosyl hydrolase family 1 signature 128 142 IPR001360 GO:0004553|GO:0005975
Adu03g00364 473 SUPERFAMILY (Trans)glycosidases 29 471 IPR017853 -
Adu03g00364 473 Gene3D Glycosidases 19 335 - -
Adu03g00364 473 Pfam Glycosyl hydrolase family 1 36 336 IPR001360 GO:0004553|GO:0005975
Adu03g00364 473 Pfam Glycosyl hydrolase family 1 343 472 IPR001360 GO:0004553|GO:0005975
Adu03g00364 473 PANTHER GLYCOSYL HYDROLASE 15 334 IPR001360 GO:0004553|GO:0005975
Adu03g00364 473 PANTHER GLYCOSYL HYDROLASE 336 472 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00364 Adu-Chr3 3293776 3319493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00364 34 472 Glycoside Hydrolase AT5G44640 54.717 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00364 - K01188 gmx:100801874 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00364 03 3293776 3319493 Adu03g00364 03 3293776 3319493 ECH