Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00361 ATGATAAAGCCTCATCTTTTGCATCAATCATACCAAAAAACCAACCATACCTTCTTCTCTCTTCATAGGCCATACTTCCATGGCGGCCGCGGCGACATTGGCACCAACAAAATTAGAACTTTATCAACTCTTCCACTACTATGGCCGGCTCACGTGAAGAAGAGGGAAAGACTTAAGCACCTTGTCCTTCCCCCTCCTCTCGCGCAAGCTAGCCCTAGTTCTTCAGCTACCACAAAAGACATAGATCATGTTATTGATGACACCAATGAGAATAAGGACAATGGTGTTGTGAATGTTAAAGCGGTGGTTAAGGTGAAGTTAACAAAGGCTGGGTTTTTTTCAAGTCTTAGTTTGGACCGTGGAATTGATGATTTAACTGATTTGCTTGGTAAATCTATCTTGTTGGAACTTGTTAGCTCCCACCTTCATGATTCTGAGGGTGGAATGGAGAAGGAGACGATTAAAGCATACGCACACAAAGCAGGGGGAGATGAGAAGTCGGTTATGTATGAAAGCAATTTTGAAGTAGCAAATGATTTTGGAGAGATTGGTGCAGTTCTTGTTGAGAATGAGCATCACACTGAGATGTTCCTTGAAACCATTACCCTCCATGGCTTCCCGGAGGGTCCTGTTCATTTTGATTGTGCTTCATGGGTTCATTCTAAGTTCGATAATACCACCAAAAGAATATTCTTCACCAATAAGTGTTACTTACCATCGGAAACCCCGAGTGGTTTAAGAAGATTAAGAGGAGAAGAATTGAGTAACCTGAGAGGGAATGGAGAAGGAACACGAAAAAGCTTTGAAAGAGTTTACGATTACGACATTTACAACGACATTGGTGATCCAGACAAAAGCCTTGATCTTCAGAGGCCTCCCTTAGGCGGCAAAGAACGACCTTATCCCCGCCGTTGCCGAACCGGCCGTCCACACTGCGAAGCAGATCGTTGGTCGGAGAATAGGAATAATGGAAAAAAATTCTACGTTCCAAGGGATGAGTGCTTCTCGGAGGTGAAGGAGCTAACGTTCTCAACAAAGGCACTGCACGCAGTGCTTCTGATACTGGTTCCGTCGCTGGGGAGAATCATCAAAGACAAGGATCTTGAGTTCCCGTTCTTCCATGATATTGATTCACTCTTCAGCGTTGGACTCGATTTGGCTCCTCAACCTGATGATGCAACTGAGCACGGATTTCTTGGAGCCATCATGCCTAGGCTTGTCAAATCCATTGCCGCTGGTGATCGCCAACATGTTCTTCGCTTCGAGACCCCCGAGACAATGAACAGGGATAGATTTTTCTGGTTTAGAGATGAGGAATTTGCTAGACAGACTGTTGCTGGCCTCAACCCACTTAGCATAAGTTTGGTCAAGGAATGGCCTTTGAGGAGCAACCTTGACCCAGGTAAATACGGTCCACAAGAATCAGCAATTACTTCTGAAATTATCAATAAAGAGATAGGAGGAATACTTACCGTAGAAAATATAAATAAAATTTGGCAGGCTATTGAAGAAAAGAAGTTGTTCATTTTGGACTACCATGATATATTATTACCATATGTTAGCAAAGTAAGGAAACTGAAGGGGAAAACACTGTATGGGTCAAGAACTTTGTTCTTTCTAACTCCAGAAGGGACACTGAGACCTCTTGCCATTGAACTTACAAGACCTCCCATGGATGGAAAAAAGCAATGGAAGCAAGTCTTCACTCCTTCTTGGCATTCAACAAGTGTTTGGCTATGGAGGATTGCTAAGGCCCATGTTCTTGCACATGACTCTGGCTATCACCAACTTATTAATCATTGGTTAAGAACTCACTGTGTGACAGAGCCATATGTTATTGCAACAAATAGACAACTTAGTATAATGCATCCTATATATAAATTGCTACACCCTCATTTTCGTTACACATTAGAGATTAATGCATTGGCACGAGAAGCACTTATTAATGCTGATGGAACAATTGAGAGCTCATTCGCACCGGGAAAGTATGCCATGGAGATTAGCTCTGCTGTCTATCATCATGATTGGCGATTTGACATGGAATCTCTACCTGCAGACTTAATCAGAAGGGGAATTGCCATAAAAGATCCATTTGAACCACATGGGTTAAGACTAACAATCAAAGATTACCCTTTTGCCAATGATGGACTCCTTTTATGGGACATTATCAAGCTATGGGTGACGGATTATGTGAACCATTATTACCCTAATTCAAGTGTTGTGGAGCATGATGAGGAGCTTCAAGCATGGTGGAAAGAGATAAGAACAGTTGGACATGGTGACAAAAAGGATGAACCATGGTGGCCAATTCTCAACACTCCAAAGGACTTAATTGGAATTCTAAGCACAATAATTTGGGTAACTTCTGGTCACCATGCAGCTGTAAACTTTGGTCAATACACATATGGTGGTTACTTCCCAAATAGGCCAACAATTGCAAGGACCAAAATGCCCTCGGAAGACCCTTCAGAAGAAGAGTGGAAGGAGTTCCTTAAGAAGCCTGAAAGAGCACTTCTTAAGTGTTTTCCTTCTCAGCTTCAAGCAACTAGAGTCATGGCCGTCTTGGATATTCTCTCCACTCATTCGCCCGACGAGGAGTACATCGGGGAGAAGATGGAACCTTCTTGGGGTGAAGACCCTGTTATAAGAGATGCATTTGAAAGGTTTAAAGCCAGATTGAAGAAACTTGAAGTACTCATTGATGAGAGGAATGAGAATACAAAGTTGAAGAACAGAAATGGTGCTGGTATTGTTCCTTATGAACTTTTGAAGCCTTTTTCAAAGCCAGGAGTCACTGGAAAGGGGGTTCCTTGCAGTATTTCCATTTGA 2829 0.4263 MIKPHLLHQSYQKTNHTFFSLHRPYFHGGRGDIGTNKIRTLSTLPLLWPAHVKKRERLKHLVLPPPLAQASPSSSATTKDIDHVIDDTNENKDNGVVNVKAVVKVKLTKAGFFSSLSLDRGIDDLTDLLGKSILLELVSSHLHDSEGGMEKETIKAYAHKAGGDEKSVMYESNFEVANDFGEIGAVLVENEHHTEMFLETITLHGFPEGPVHFDCASWVHSKFDNTTKRIFFTNKCYLPSETPSGLRRLRGEELSNLRGNGEGTRKSFERVYDYDIYNDIGDPDKSLDLQRPPLGGKERPYPRRCRTGRPHCEADRWSENRNNGKKFYVPRDECFSEVKELTFSTKALHAVLLILVPSLGRIIKDKDLEFPFFHDIDSLFSVGLDLAPQPDDATEHGFLGAIMPRLVKSIAAGDRQHVLRFETPETMNRDRFFWFRDEEFARQTVAGLNPLSISLVKEWPLRSNLDPGKYGPQESAITSEIINKEIGGILTVENINKIWQAIEEKKLFILDYHDILLPYVSKVRKLKGKTLYGSRTLFFLTPEGTLRPLAIELTRPPMDGKKQWKQVFTPSWHSTSVWLWRIAKAHVLAHDSGYHQLINHWLRTHCVTEPYVIATNRQLSIMHPIYKLLHPHFRYTLEINALAREALINADGTIESSFAPGKYAMEISSAVYHHDWRFDMESLPADLIRRGIAIKDPFEPHGLRLTIKDYPFANDGLLLWDIIKLWVTDYVNHYYPNSSVVEHDEELQAWWKEIRTVGHGDKKDEPWWPILNTPKDLIGILSTIIWVTSGHHAAVNFGQYTYGGYFPNRPTIARTKMPSEDPSEEEWKEFLKKPERALLKCFPSQLQATRVMAVLDILSTHSPDEEYIGEKMEPSWGEDPVIRDAFERFKARLKKLEVLIDERNENTKLKNRNGAGIVPYELLKPFSKPGVTGKGVPCSISI 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00361 942 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 236 942 IPR013819 GO:0016702|GO:0046872
Adu03g00361 942 Coils Coil 886 906 - -
Adu03g00361 942 ProSiteProfiles PLAT domain profile. 112 233 IPR001024 GO:0005515
Adu03g00361 942 PANTHER LIPOXYGENASE 49 941 IPR000907 GO:0016702|GO:0046872
Adu03g00361 942 PRINTS Plant lipoxygenase signature 229 250 IPR001246 GO:0016491
Adu03g00361 942 PRINTS Plant lipoxygenase signature 203 221 IPR001246 GO:0016491
Adu03g00361 942 PRINTS Plant lipoxygenase signature 268 284 IPR001246 GO:0016491
Adu03g00361 942 PRINTS Plant lipoxygenase signature 300 319 IPR001246 GO:0016491
Adu03g00361 942 PRINTS Plant lipoxygenase signature 855 869 IPR001246 GO:0016491
Adu03g00361 942 PRINTS Plant lipoxygenase signature 532 556 IPR001246 GO:0016491
Adu03g00361 942 PRINTS Plant lipoxygenase signature 419 435 IPR001246 GO:0016491
Adu03g00361 942 SMART LH2_4 99 234 IPR001024 GO:0005515
Adu03g00361 942 Pfam Lipoxygenase 245 925 IPR013819 GO:0016702|GO:0046872
Adu03g00361 942 Gene3D - 359 450 IPR027433 -
Adu03g00361 942 ProSitePatterns Lipoxygenases iron-binding region signature 2. 622 632 IPR020834 GO:0016702|GO:0046872
Adu03g00361 942 PANTHER LIPOXYGENASE 49 941 - -
Adu03g00361 942 SUPERFAMILY Lipoxigenase 238 942 IPR036226 -
Adu03g00361 942 CDD PLAT_LH2 120 234 IPR042057 -
Adu03g00361 942 PRINTS Lipoxygenase signature 577 594 IPR013819 GO:0016702|GO:0046872
Adu03g00361 942 PRINTS Lipoxygenase signature 595 612 IPR013819 GO:0016702|GO:0046872
Adu03g00361 942 PRINTS Lipoxygenase signature 615 635 IPR013819 GO:0016702|GO:0046872
Adu03g00361 942 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 98 237 IPR036392 GO:0005515
Adu03g00361 942 Gene3D - 592 940 - -
Adu03g00361 942 ProSitePatterns Lipoxygenases iron-binding region signature 1. 595 609 IPR020833 GO:0016702|GO:0046872
Adu03g00361 942 Gene3D - 256 355 - -
Adu03g00361 942 Gene3D - 452 591 - -
Adu03g00361 942 Gene3D PLAT/LH2 domain 95 255 - -
Adu03g00361 942 Pfam PLAT/LH2 domain 167 232 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00361 Adu-Chr3 3271155 3280757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00361 179 942 Acyl Lipid Metabolism Gene Families AT3G45140 59.061 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00361 K00454 - gmx:100797626 1456.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00361 03 3271155 3280757 Adu03g00361 03 3271155 3280757 ECH