Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00304 ATGGTTACTTCCATGAACCATCATTTGGTCCCCAAGTACCCGTTTCTTCTTCCCTCTTGCAATGGTCATAATCCTAAGCTTAGATTCCACTCTTGTGGGCAGGTTGGAGCACAGAAGGGGTATGCTTCTTCTGGGGAGGAACCTCAGTCGCGTGTTTCTGACACAAGTACATACCAAGAGGAATTCTCTTGGTCTTCTGTGATTTTTCCGTTTCTATTCCCAGCATTGGGTGGCTTGTTATTCGGTTATGATATTGGTGCCACCTCAGGGGCCACAATCTCACTGCAGTCACCTGAGCTTAGTGGCATAGCTTGGTTCAATCTTTCGGCTATTCAGCTTGGACTTGTGGTCAGTGGTTCCCTCTATGGGGCTCTTCTTGGCTCACTTCTTGCATATGCCGTTGCTGATTTCCTTGGGAGGAAGAGACAACTCATTGTTGCAGCACTGTTATATGTGCTTGGCGGTTCGATCACTGCGTATGCACCAGAGCTCAATGTCCTCTTAGCAGGAAGGCTGCTTTATGGACTTGGTATAGGTTTGGCCATGCACGGTGCTCCTTTGTATATTGCTGAAACATGTCCATCACAAATCCGTGGGACTCTAGTATCATTAAAAGAACTCTTCATTGTCTTGGGGATTCTGCTTGGTTATTTTGTGGGAAGCTTTGAGATTAATGCCGTTGGGGGATGGCGGTTTATGTATGGCTTTAGTGCTCCGATTGCTGTACTAATGGGGCTAGGAATGTTGAGTCTCCCTCCCTCTCCGAGGTGGTTGCTTCTCAGGGCCGTTCAAGGGAAGGGTTCGTTTCAAGATTTGAAGGAAAAGGCAATTCTTTCCCTGAGTAAATTAAGGGGCAGACCACCCGGCGACAAAGAATCTGAGAAGCAAATAGAAGAGAGCCTTGTTTCGTTGAAGTCTGCATATGCAGATCAGGAATCAGAAGGGAGTTTCTTGGAGGTGTTTCAGGGTGCCAATCTGAAAGCTTTCATAATTGGTGGGGGGCTTGTCTTATTTCAACAGATAACTGGCCAACCAAGTGTTCTGTATTATGCAGGCCCAATTCTTCAGAGTGCTGGATTTTCTGCTGCAGCCGATGCTACCAAAGTTTCAGTTGTTATTGGCTTATTCAAGTTGCTAATGACATGGATTGCTGTCTTAAAAGTTGATGATTTGGGGAGAAGGCCTCTTCTGATTGGAGGTGTCACTGGCATTGCCCTTTCTTTAGCTCTTCTTTCTGCTTATTATAAATTTCTTGGAGGGTTCCCACTTATTGCTGTTGCGGCTTTACTTCTTTATGTTGGTAGCTATCAGGTATCATTTGGCCCAATAAGTTGGCTAATGGTATCAGAAGTTTTCCCGTTGCGCACAAGAGGACGGGGGATCAGTCTGGCTGTTCTAACCAACTTTGCTTCAAATGCAGTTGTGACCTTTGCATTCTCTCCTTTAAAGGAGCTTCTAGGAGCAGAAAACCTTTTTCTCCTTTTTGGGGCTATTGCTTTACTGTCACTTATCTTTGTTATATCTTCAGTTCCCGAAACAAAAGGCTTGAGCCTAGAAGATATTGAGTCCAAAATCTTGAAATGA 1584 0.4508 MVTSMNHHLVPKYPFLLPSCNGHNPKLRFHSCGQVGAQKGYASSGEEPQSRVSDTSTYQEEFSWSSVIFPFLFPALGGLLFGYDIGATSGATISLQSPELSGIAWFNLSAIQLGLVVSGSLYGALLGSLLAYAVADFLGRKRQLIVAALLYVLGGSITAYAPELNVLLAGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILLGYFVGSFEINAVGGWRFMYGFSAPIAVLMGLGMLSLPPSPRWLLLRAVQGKGSFQDLKEKAILSLSKLRGRPPGDKESEKQIEESLVSLKSAYADQESEGSFLEVFQGANLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATKVSVVIGLFKLLMTWIAVLKVDDLGRRPLLIGGVTGIALSLALLSAYYKFLGGFPLIAVAALLLYVGSYQVSFGPISWLMVSEVFPLRTRGRGISLAVLTNFASNAVVTFAFSPLKELLGAENLFLLFGAIALLSLIFVISSVPETKGLSLEDIESKILK 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00304 527 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 46 527 - -
Adu03g00304 527 PRINTS Sugar transporter signature 78 88 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00304 527 PRINTS Sugar transporter signature 168 187 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00304 527 PRINTS Sugar transporter signature 339 349 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00304 527 PRINTS Sugar transporter signature 426 447 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00304 527 PRINTS Sugar transporter signature 449 461 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00304 527 SUPERFAMILY MFS general substrate transporter 60 522 IPR036259 -
Adu03g00304 527 Gene3D MFS general substrate transporter like domains 61 525 IPR036259 -
Adu03g00304 527 Pfam Sugar (and other) transporter 73 522 IPR005828 GO:0016021|GO:0022857|GO:0055085
Adu03g00304 527 CDD MFS_GLUT10_12_Class3_like 73 521 - -
Adu03g00304 527 ProSitePatterns Sugar transport proteins signature 2. 173 198 IPR005829 GO:0016021|GO:0022857|GO:0055085
Adu03g00304 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 70 514 IPR020846 GO:0022857
Adu03g00304 527 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 46 527 - -
Adu03g00304 527 TIGRFAM SP: MFS transporter, sugar porter (SP) family 66 521 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00304 Adu-Chr3 2752366 2755895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00304 19 527 Organic Solute Cotransporters AT5G59250 77.237 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00304 - - aip:107629076 960.674