Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00292 ATGATTTTTTCAAGGATTGGGCGCTCACTCTCGCGCTCTTCACGCGCCAAAGATTATTTGCGCGGCGATGCGAAATTGGGAACCCTTCTCGGAGCTACGCGAACGAATGTGCATTCGGAAGGAATGGAGTTGGGATTAGGGTTTTTTAGGGGATATGTTGCACATGCTAGAGCTCGTGGAAACGGAATCCTTTCCAGTTTGCCTAATTTTAAGTGTATTGCGGCAAACCCTAAGATTCATTACCGGTTGTTTTCCAGCGAAGGACCTAAGAAGAAGAATTATGAGAACTTCTATCCCAAGGAGAAGAAGGAAATTCCAAAGGGGGAGGATAAAAAGCATGAGTCTAAAGAAGAGTCAGAGACAAACACAGATGATCATGGAAGTTTTCAAGAGACTTTCATGAAACAAGTTCAAAATTTTATCACTCCTTTATTGGTGATGGGGCTATTTCTTGGATCATTTAATTTTGGTCCTCGTGAACAGCAACAGATTAGCTTTCAGGAGTTTAAAAATAAGCTTTTGGAGCCAGGATTAGTAGACCATATTGTTGTGTCAAATAAGTCGGTTGCCAAAATATACGTGAGGAATACTCCTCGTAACCAAACGGAGAGTGAAGTTATCCAAGGAACCCTCCCCGCAAAGGGAACTGGTGGGCAATATAAATATTATTTCAATATTGGAAGTGTGGAATCTTTTGAGGAGAAGTTAGAAGAAGCGCAAGAAGCACTAGGCATTGACCCCCATGATTATGTTCCTGTTACATATTCTTCTGAAATGGTTTGGTACCAGGAATTGATGAGGTTTGCTCCAACACTGTTGCTTTTGGGATCCCTCTTCTATATGGGAAGGAGAATGCAAGGTGGACTTGGTGTTGGCGGCGGTGGCGGTAATAAGGGTGCTCGTGGAATATTTAACATAGGGAAAGCCCATGTTACTAAAGTAGACAAGAATGCGAAAAATAAGGTTTTCTTTAAAGATGTTGCTGGTTGTGATGAGGCAAAGCAAGAAATTATGGAGTTTGTCCACTTCCTTAAGAACCCAAAGAAATATGAAGAACTAGGGGCAAAAATCCCCAAGGGTGCTCTCCTGGTTGGTCCTCCTGGCACAGGAAAAACCCTTTTAGCAAAAGCAACAGCAGGGGAATCTGGTGTTCCATTTCTTTCGATATCTGGTTCAGATTTTATGGAGATGTTTGTTGGTGTTGGACCATCTAGGGTAAGAAACTTGTTTCAGGAAGCAAGGCAGTGTGCCCCTAGTATTATATTTATTGACGAGATTGATGCAATTGGTCGAGCAAGGGGACGTGGAGGTTTCTCTGGTGCAAATGATGAACGTGAAAGTACATTAAATCAGTTACTGGTGGAGATGGATGGTTTTGGAACCACTGCTGGGGTGGTTGTACTTGCTGGAACAAATAGACCTGATATCTTGGACAAAGCTCTACTTAGGCCAGGGAGATTTGACCGCCAGATAAGCATTGATAAGCCCGATATTAAGGGTCGTGACCAGATATTTCAGATCTACTTGAAAAAGATCAAACTTGACCACGAGCCTTCATTTTATTCACAAAGGCTTGCAGCCCTTACACCAGGATTTGCGGGAGCAGACATTGCTAATGTTTGCAATGAAGCTGCGCTGATTGCTGCAAGGGGTGAGGAAACACAAGTGACAATGCAACATTTTGAAGCAGCTATTGATAGGATCATTGGTGGTTTGGAGAAGAAGAACAGGGTGATAAGCAAGCTGGAAAGACGTACTGTAGCTTACCATGAATCAGGTCATGCCGTTGCAGGCTGGTTCTTGGAACATGCCGAACCTTTGTTGAAAGTTACTATAGTTCCTCGTGGCACAGCAGCCCTTGGGTTTGCACAGTATGTTCCAAATGAGAACCTTCTCATGACAAAGGAGCAGCTTTTTGATATGACTTGTATGACACTAGGTGGTCGAGCTGCTGAGCAGATTCTCGTAGGAAGAATCTCAACTGGTGCGCAGAATGACTTGGAAAAAGTGACCAAGATGACATATGCCCAAGTAGCAATCTATGGTTTTAGCGACAAAAGTGTTGCTAGTGTTAATCATAATGGAGAAATCCTAAGAACTCAAGCCAACTTAATTCAGGTGCCAATGGAAGAAAATAATGGACATGATCTGTTCCATGAAGCTTCAAAGGCTAAGTACGATTGTCTTTTGTTTGATCTTGATGACACCCTTTATCCTTTTAGTTCTGGTATGACAGTCCAGATCGGAGAAAAAGTTATAGAGTATGTGGTACAAAAGATTGGTATAGAAGATGTGGCTAAGGTCCGTGAATTGTGCCTTGCGTTATATAAGACTTATGGAACAGTATTGGCTGGTTTCAAGGCAATTGGCTATGACTTTGACTATGATGACTTTCATAGATTTGTTCATGGGAGATTGCCATATCACTTGCTGAAAACAGATCCAGTTCTAAGGGGTATTTTGCAAAGCCTCCCTATTAGGAAAGTGATTTTTACAAATGCAGACCATAGTCATGCAGTTCGGGCACTCCAAAGGCTTGGACTTGAGGATTGCTTTGAAAGAATCATAAGCTTTGATACTCTGAATCCCTCCAACAAGATCAATACACTTGATGTTAAAAATGGCAGCGAATCCAAACCAGTTTCCACTGAAATTTTCGATTTCTATGAGTACGTGCGCCACCCAGGCCCTGACGTGATACTTCCAAAGACTCCAGTTGTTTGTAAACCCTTTGAAGATGCATTTGAGAATGTTTTTGAGATAGCAAATATTGACCCTAAGAGAACATTGTTCTTTGATGATAGTACCCGCAATTTACTGACAGCCAAACGCGTAGGCCTCCACACAGTTGTGGTTGGTACTTCCGTTCGAACTACAGGAATTGATCATGCTTTGGAAAGCATCCATAATATCAGGGAGGCATTTCCAGAACTCTGGGAAGCCAGCGAAAAGCATGAAATTGTCAAATATAAGGTTGCAATTGAGACATCAGTGAAAGCTTAG 3003 0.4226 MIFSRIGRSLSRSSRAKDYLRGDAKLGTLLGATRTNVHSEGMELGLGFFRGYVAHARARGNGILSSLPNFKCIAANPKIHYRLFSSEGPKKKNYENFYPKEKKEIPKGEDKKHESKEESETNTDDHGSFQETFMKQVQNFITPLLVMGLFLGSFNFGPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKIYVRNTPRNQTESEVIQGTLPAKGTGGQYKYYFNIGSVESFEEKLEEAQEALGIDPHDYVPVTYSSEMVWYQELMRFAPTLLLLGSLFYMGRRMQGGLGVGGGGGNKGARGIFNIGKAHVTKVDKNAKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGANDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFQIYLKKIKLDHEPSFYSQRLAALTPGFAGADIANVCNEAALIAARGEETQVTMQHFEAAIDRIIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQILVGRISTGAQNDLEKVTKMTYAQVAIYGFSDKSVASVNHNGEILRTQANLIQVPMEENNGHDLFHEASKAKYDCLLFDLDDTLYPFSSGMTVQIGEKVIEYVVQKIGIEDVAKVRELCLALYKTYGTVLAGFKAIGYDFDYDDFHRFVHGRLPYHLLKTDPVLRGILQSLPIRKVIFTNADHSHAVRALQRLGLEDCFERIISFDTLNPSNKINTLDVKNGSESKPVSTEIFDFYEYVRHPGPDVILPKTPVVCKPFEDAFENVFEIANIDPKRTLFFDDSTRNLLTAKRVGLHTVVVGTSVRTTGIDHALESIHNIREAFPELWEASEKHEIVKYKVAIETSVKA 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00292 1000 MobiDBLite consensus disorder prediction 95 125 - -
Adu03g00292 1000 SMART AAA_5 357 497 IPR003593 -
Adu03g00292 1000 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 12 893 IPR005936 GO:0004176|GO:0004222|GO:0016020
Adu03g00292 1000 Pfam FtsH Extracellular 142 248 IPR011546 GO:0004176|GO:0004222|GO:0005524|GO:0008270|GO:0016021
Adu03g00292 1000 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 321 568 IPR027417 -
Adu03g00292 1000 Gene3D - 793 979 IPR023214 -
Adu03g00292 1000 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 10, MITOCHONDRIAL-LIKE 35 686 - -
Adu03g00292 1000 CDD AAA 358 495 - -
Adu03g00292 1000 SUPERFAMILY HAD-like 728 956 IPR036412 -
Adu03g00292 1000 Gene3D Peptidase M41 572 724 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Adu03g00292 1000 Gene3D - 149 260 - -
Adu03g00292 1000 Pfam Peptidase family M41 577 687 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Adu03g00292 1000 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 721 982 - -
Adu03g00292 1000 PANTHER ATP-DEPENDENT PROTEASE 35 686 - -
Adu03g00292 1000 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 261 700 IPR005936 GO:0004176|GO:0004222|GO:0016020
Adu03g00292 1000 SUPERFAMILY FtsH protease domain-like 578 688 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Adu03g00292 1000 Gene3D - 305 494 IPR027417 -
Adu03g00292 1000 Pfam AAA+ lid domain 524 563 IPR041569 -
Adu03g00292 1000 Pfam ATPase family associated with various cellular activities (AAA) 362 494 IPR003959 GO:0005524|GO:0016887
Adu03g00292 1000 SFLD C1.5.3: 5'-Nucleotidase Like 721 982 IPR010237 -
Adu03g00292 1000 ProSitePatterns AAA-protein family signature. 465 483 IPR003960 GO:0005524|GO:0016887
Adu03g00292 1000 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 727 952 IPR010237 -
Adu03g00292 1000 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 904 952 IPR006439 -
Adu03g00292 1000 Gene3D - 496 571 - -
Adu03g00292 1000 MobiDBLite consensus disorder prediction 95 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00292 Adu-Chr3 2666875 2681294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00292 1 686 Miscellaneous Gene Families AT2G29080 76.657 0.0 1002
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00292 K08956 - gmx:100806656 1131.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01224 08 21339759 21342364 Adu03g00292 03 2666875 2681294 PCT