Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00241 ATGTCGTCGCCCTCGGTGACTTCGAGTTCCGCTTCCAAGGGAAGGAAAACGATGACGGACCTTCATCATGTTCCGAAGAAATGGACCGAGAGAGAAACGAGTCCAGAGAGGACCAAGGTTTGGACTGAACCCAAGCCCAAAACGGCAAGAAAAGTATCCGTCGTTTACTACCTCTCCCGAAGCGGCCACCTCGAGCACCCTCACTTCATGGAGGTTCCTCTCTCCTCACCACAAGGACTCTACCTCAAAGATGTAATCAATCGCTTGAACCTGCTTCGAGGAAAAGGCATGGCTGCAATGTATTCATGGTCCGCCAAACGGAGCTACAAAAATGGCTTCGTGTGGCACGATTTATCGGAGAACGATTTCATTTACCCGACGCAGGGGCAAGACTACATTCTCAAAGGATCTGAGATTGTTGATCATGATGCGAGAGCTTCCGAGACGCAGAAACCGGAGGAGGAAGAGGCTAATTTCCCCGCGGTCGCAGTGACGCGGCGGCGCAATCAGTCGTGGAGCTCCATTGACATGAACGAGTACCTTGTTTACAAGTCGGACTCGTTCGGAGACTCCGCCGGAAAAATTGCCGCTGACGCGTCGACTCAGACGACGGACGATAGGCGGCGGAGGAGGAGGGCGGCTAGGGAAGAGGAGAAGAGTCAGAAGAAGAAAGGAGTCGAAGACAAAGGAGAAGAAATCACGGAATCGGAGCAGGTCCCGCATGCCACGTGTCATAATCAGAGCATTGAGCTGAGCAGGGACGAGATCTCGCCTCCGCCGTCGGATTCGAGTCCGGAGACGCTTGAGACGCTGATGAAGGCGGATGGACGGCTGGGATTGTGTTCTGCGAAGATTAACAATAATAATGTGACGGCTGAGAATGGTCATAGCGGAAGGATGAGGGCTTCGTCGGTTCTCTTGCAGTTACTATCGTGCGGTGCGGTGTCGTTTAAGGAGTGTGGGGCCGAGTCTGATAAGGATCAAGGGTTCTCATTGGTTGGGCACTACAAAGCTCGGTTACCCCGCGGATCAGGGAATAATAATGCTAATCAAGTGGGAAAAGAGGTAGGGACATCGATGGAAATTCCAGATTTGAACAGGGTAACATTGGAAGATAAGGAGTATTTTAGTGGGAGCTTGATTGAGACCAAGAAAGTTGAATTCCCTGCGTTGAAGAGGTCCTCTTCTTACAATGCAGATAGTGGTTCCCGGTTGCAAATCATGGAGCAAGACGGAGACATGGTGCGAGCAAAGTGCATACCAAGAAAGTCCAAGACACTATCAACAAAGAAAGAAGATGGTTCTTCTCAACACGGTAGCAAAAGATTTGAGGTACACGAAGGGTTTGTTTGGGAAGTGGGAGCTCTTTCTAAAAATTTCTGGTTTGACTCTTGGTTGCACTCTGGGCCAGTAGGAGCGAAGGTTGAATTTCTTGATATCTGTGAGGCTGCTTTGACCATTGAAGATGTTTACCGTGATGGAGTTTGGCATTTGGAGAGGATTTACTCTTTTATTCCTAGGGACTTAAGGGAAGACATTCTTAGTTTAGTACCTATTTCGACTTCTGGTCGTGATTTGGGTTGGAGTTGGGAGCACACTATTTACTCTGCTAAACAAGGATATTTATGGTTAATTCAGAAGAAGTTGAATTGGGATAGGAATATCAACTGGCTTTGGCTTTGGAAGGCGCGGATCCCTGAAAAGTTGAGGCTCCTAGTGTGGCTTTGCCTTCATGATGCTGTACCAACTCAATATCTGCGTTTTCGGCGACATCTCTCCTCCTCATCCTTATGTACACGTTGCAATCAACTTCCGGAGACAATTCTTCATTATTTTCGGGATTGTGAAGTGGTGCGATCAGTTTGGGTTTCTCTAGATTTTTCTGATGTGTGTTTCTTTGGCTCTTACGAGGAAGTTTTTGGATCTACTGGGTCAATTGCATACAAGGCTCGCAGGTGCATGGTGGATTTTGAATATACAACTCAGAATCGAGTGTGTTGCATCCAGGGATTAAAACCTCTGTCTTGGTCTCCGCCAGAACCTGGAAATTCCTTTGGATCTAGTGTCATCAAGATGGAGTTGTGGAGTATATGGAAAGGTTTGGCTTGGGCTTGGGAGGCGGGTCTTAAGCTTGTTGTCTGTGAGACAGATTGCACAGCAGCTTTTGAGCTAGTGACTGGTTGGCAAGTTCCACTCTGGCATCTTGAAAAAGAAGTGATACAACTGATCTTTGACTTGAAGTTAAGAAGGGATTGGGATATTCGTTTTGAGCTTATCCCGAGAGAAGCTAATGTCGTGGCAGATCGGTTGGCAAAGATGGGATCTGGAGGTAGCGGAACTGATGAGGTTCACCTTTGA 2358 0.4792 MSSPSVTSSSASKGRKTMTDLHHVPKKWTERETSPERTKVWTEPKPKTARKVSVVYYLSRSGHLEHPHFMEVPLSSPQGLYLKDVINRLNLLRGKGMAAMYSWSAKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEIVDHDARASETQKPEEEEANFPAVAVTRRRNQSWSSIDMNEYLVYKSDSFGDSAGKIAADASTQTTDDRRRRRRAAREEEKSQKKKGVEDKGEEITESEQVPHATCHNQSIELSRDEISPPPSDSSPETLETLMKADGRLGLCSAKINNNNVTAENGHSGRMRASSVLLQLLSCGAVSFKECGAESDKDQGFSLVGHYKARLPRGSGNNNANQVGKEVGTSMEIPDLNRVTLEDKEYFSGSLIETKKVEFPALKRSSSYNADSGSRLQIMEQDGDMVRAKCIPRKSKTLSTKKEDGSSQHGSKRFEVHEGFVWEVGALSKNFWFDSWLHSGPVGAKVEFLDICEAALTIEDVYRDGVWHLERIYSFIPRDLREDILSLVPISTSGRDLGWSWEHTIYSAKQGYLWLIQKKLNWDRNINWLWLWKARIPEKLRLLVWLCLHDAVPTQYLRFRRHLSSSSLCTRCNQLPETILHYFRDCEVVRSVWVSLDFSDVCFFGSYEEVFGSTGSIAYKARRCMVDFEYTTQNRVCCIQGLKPLSWSPPEPGNSFGSSVIKMELWSIWKGLAWAWEAGLKLVVCETDCTAAFELVTGWQVPLWHLEKEVIQLIFDLKLRRDWDIRFELIPREANVVADRLAKMGSGGSGTDEVHL 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00241 785 Pfam Protein SOSEKI, plant 52 401 IPR010369 -
Adu03g00241 785 MobiDBLite consensus disorder prediction 1 15 - -
Adu03g00241 785 SUPERFAMILY Ribonuclease H-like 686 776 IPR012337 -
Adu03g00241 785 MobiDBLite consensus disorder prediction 16 44 - -
Adu03g00241 785 Pfam zinc-binding in reverse transcriptase 535 622 IPR026960 -
Adu03g00241 785 MobiDBLite consensus disorder prediction 201 238 - -
Adu03g00241 785 CDD RNase_H_like 686 772 IPR044730 -
Adu03g00241 785 Pfam Reverse transcriptase-like 691 773 IPR002156 GO:0003676|GO:0004523
Adu03g00241 785 MobiDBLite consensus disorder prediction 1 44 - -
Adu03g00241 785 PANTHER OS01G0839200 PROTEIN 18 424 - -
Adu03g00241 785 Gene3D - 674 775 IPR036397 GO:0003676
Adu03g00241 785 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 18 424 IPR010369 -
Adu03g00241 785 MobiDBLite consensus disorder prediction 194 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00241 Adu-Chr3 2289163 2295516 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00241 - - adu:107476876 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00241 03 2289163 2295516 Adu03g00241 03 2289163 2295516 ECH