Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00188 ATGTCGGCACCGCAGAGGCTTCTCTGCACTCTCTCTTCCAGAACCTTCCTCTTACTTCCATTTTCCCATCCCTACAGAACTCTCGCTTCTCCTCCTTCTCCTTTCTCACTCATCCCAATGCCTCGCAATCAGCGGAGGGGACAACAATGGAAGGAGAAACCGAAACGCGAAGGGGAATTATCGGCTGCGGCTGGGGGAGGTGCAACTACTTCTGGTTCAGCTGAAACAGTTACTAACGGCCTTGCCGGGTTGCGTATTGCTGAAAGCGGGGCGGCGAAAACCAGTGTTGGAGCTGGTGGCCAAGATAGGAAGGTGATTTGGAAACCGAAATCTTATGGAACTGCGAGTGGAGTCGCAACTGCCGAAGCTGAAATGGCCGGTAAAGGTGCAGCTGATGCTGCTGCTGCTGCAGGGGCTGAAGCTGTTGTGGCTTCGCCCAAAACGAGTGGTAGTCCCAGTTTGAGCAAGTTGTTTAGCGCTAATTTGTTGGAGAAATTTACTGTGGACAACAACACATACTCGCAGGCGCAAATCAGAGCTACTTTCTACCCGAAATTCGAGAATGAGAAGTCAGATCAAGAGATAAGGATAAGAATGATTGAGATGGTATCTAAAGGTTTGGCTACGTTAGAGGTTTCTCTCAAACACTCTGGTTCTCTTTTTATGTATGCGGGTCATGAAGGTGGAGCTTATGCGAAAAATAGTTTTGGAAATATATATACTGCTGTTGGTGTATTTGTACTTGGGCGGATGTTTCGCGAGGCTTGGGGAGCTGCGGCTTCTAAAAAACAAGCTGAATTTAATGATTTTCTTGAGAGAAACCACATGTGCATATCAATGGAACTTGTAACTGCTGTTCTTGGTGATCATGGACAGCGTCCCCGAGAAGATTATGCGGTAGTTACAGCAGTTACTGAATTGGGCAATGGAAAGCCAAGGTTCTATTCAACTCCTGAAATAATTGCTTTCTGCAGAAAATGGCGCCTACCTACAAATCACGTGTGGCTGTTTTCAACAAGGAAATCAGCATCATCCTTCTTTGCTGCCTATGATGCTTTATGTGAGGAGGGTACTGCAACACCGGTGTGCAAGGCTCTTGATGAAATTGCAGATATATCTGTACCAGGTTCTAAAGACCATATAAAGGCCCAAGGTGAAATTCTGGAAGGTCTCGTAGCTCGTCTTGTGAGTCATGATAGTCCAAATCATATGAAGAAAATTTTGAAAGAATACCCTTTTCCACCTGCTGATGGAGATGCCCTTGATTTGGGACCAAGTCTAAGGGAAATTTGTGCTGCAAATAGGTCTGATGAAAAACAGCAAATAAAAGCTCTTCTTGAGGGTGTTGGTAGTTCTTTTTGTCCCGACTACTCGGATTGGTTTGGGATTGGTGCTACTGATTCTCATTCAAGAAATGCAGACCGATCTGCTGTTTCAAAGTTTTTGCAAACCAATCCTGCAGACTATTCAACTAAAAAGTTGCAGGAAGTTGTCCGGTTGATGAGGGAAAAACGCTTCCCCGCTGCATTCAAATGTTATCATAACTTCCACAAAGTTGATGACATATCAAGTGACAATCTTTTCTACAAAATGGTCATTCATGTACACAGTGACTCAGCTTTCAGGAGATACCAGAAAGAAATGAGGCATAAACCTGGATTATGGCCACTATATCGTGGATTCTTTGTTGATATCAATTTATTCAAGGCAAACAAGGAGAGAACCACTGAAATTTCAAAGAATAATAGTACAAGTGAAAATGGTAGTGATAGCTCTGAGAAAGAAGAATTAGCTGATGAAGATGCAAACTTAATGGTCAAATTGAAATTTCTTACGTATAAGTTGCGAACATTTCTCATTCGAAATGGCTTGTCAATTCTGTTTAAAGAAGGTCCAGGTGCTTACAAGGCTTATTACCTGAGACAAATGAAAATCTGGGGAACCTCCCCAGGAAAGCAGAGAGAACTTAGCAAGATGCTTGATGAATGGGCTGTCTTTATAAGAAGGAAGTGTGGAAATAAGCAACTATCATCATCAACTTATCTTAGTGAAGCTGAACCTTTCCTTGAACAATTCGGAAGACGAAGTCCTCTGAACCAGGCTCTAATAGGCTCTGCGGGTAATTTAGTTAGGACTGAAGATTTCTTGGCCATTGTTGAGGAAGGCCAGGATGAAGAAGGTGATCTTGCAGCAGAGCGGGAGTCAGTGTCACCTGGGCCTAGTATCCCAGTTCAAGACACGGTCCCAAAAGCTGATGGGCTGATTGTATTCTTTCCTGGAATACCTGGTTGTGCTAAGTCTGCCCTTTGCAAAGAATTGCTAAAGGCTAAAGAAGGATTAGGAGATGAGCGGCCAATGCATAGTCTCATGGGTGATATGATAAAAGGAAAATATTGGCAGAAAGTGGCTGAAGAACGCAGAAGGAAACCAAAGTCTATAATCCTTGCTGACAAGAATGCCCCAAATGAAGAAGTTTGGAGATTGGTTGGTTAA 2493 0.4356 MSAPQRLLCTLSSRTFLLLPFSHPYRTLASPPSPFSLIPMPRNQRRGQQWKEKPKREGELSAAAGGGATTSGSAETVTNGLAGLRIAESGAAKTSVGAGGQDRKVIWKPKSYGTASGVATAEAEMAGKGAADAAAAAGAEAVVASPKTSGSPSLSKLFSANLLEKFTVDNNTYSQAQIRATFYPKFENEKSDQEIRIRMIEMVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGAAASKKQAEFNDFLERNHMCISMELVTAVLGDHGQRPREDYAVVTAVTELGNGKPRFYSTPEIIAFCRKWRLPTNHVWLFSTRKSASSFFAAYDALCEEGTATPVCKALDEIADISVPGSKDHIKAQGEILEGLVARLVSHDSPNHMKKILKEYPFPPADGDALDLGPSLREICAANRSDEKQQIKALLEGVGSSFCPDYSDWFGIGATDSHSRNADRSAVSKFLQTNPADYSTKKLQEVVRLMREKRFPAAFKCYHNFHKVDDISSDNLFYKMVIHVHSDSAFRRYQKEMRHKPGLWPLYRGFFVDINLFKANKERTTEISKNNSTSENGSDSSEKEELADEDANLMVKLKFLTYKLRTFLIRNGLSILFKEGPGAYKAYYLRQMKIWGTSPGKQRELSKMLDEWAVFIRRKCGNKQLSSSTYLSEAEPFLEQFGRRSPLNQALIGSAGNLVRTEDFLAIVEEGQDEEGDLAAERESVSPGPSIPVQDTVPKADGLIVFFPGIPGCAKSALCKELLKAKEGLGDERPMHSLMGDMIKGKYWQKVAEERRRKPKSIILADKNAPNEEVWRLVG 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00188 830 PANTHER TRNA LIGASE 1 103 827 - -
Adu03g00188 830 MobiDBLite consensus disorder prediction 577 596 - -
Adu03g00188 830 PANTHER TRNA LIGASE 1 103 827 IPR038837 GO:0003972|GO:0006388
Adu03g00188 830 MobiDBLite consensus disorder prediction 31 75 - -
Adu03g00188 830 Coils Coil 828 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00188 Adu-Chr3 1757140 1765616 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00188 - - aip:107629182 1569.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00188 03 1757140 1765616 Adu03g00188 03 1757140 1765616 ECH