Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00152 ATGTACAAGAACCAGCTTCAGGAGCTGGCACAGCGAAGCTGCTTCAACCTCCCTTCGTACACGTGCATAAGGGAGGGTCCGGATCACGCGCCGCGCTTCAAAGCCACCGTTAACTTCAACGGCGAAGTCTTCGAGAGCCCACACTACTGCTCAACTCTCCGCCAGGCCGAGCACTCCGCCGCCGAGGTCGCTCTCAACTCCCTCTCCCACCGTGGACCCTCTCACTCCCTCGCCGCCAGGATCCTCGATGAAACTGGAGTATACAAGAATCTCTTACAGGAGATCGCGCAAAGGGTAGGTGCTCCATTGCCACAGTACACAACATACAGGTCAGGACTCGGACATCTACCTGTTTTCACCGGGACAGTTGAGTTGGCTGATATCACATTTACCGGCGAACCTGCCAAGAACAAGAAGCAAGCGGAGAAAAATGCAGCAATGGCAGCCTGGTCCTCTCTAAAACAATTGGCAAAAGAAACTGCAAGCTCTTCAACCGAACCGGAGAATAACGACGAGCTAGAACAGATCACGATTGCTCGGGCCTTATTAAACTATCGTCAAAAAGAGAAGATGGCTATGTCACACCCAGATGCTTCAATTCCATTTCCAAAGAAGTTTCAAATTCAAAGTCCCAGGCCAACTAGTCCTCAATCACGACCTGCCGCGGCATCTAAGATACTTCCCTTGATTTTCCCGAGGACATCCTCTCGAAGCAGGCCTTCCTTTGCAACACCGAACGAAAGCTCTCGAAGCAGGCCTGCAGTAGTGACAACAGCTTCCGGTGAGAGTTCCATGATCTCACCACCATCTTCTATGTTAGAAAGCCGAGTGAACCGTCGACCAAGGTTCCCTGCAGCTGGAGCAGCACCTTATGTTCCCATTGGACAGATGAGATTACCTTGCCGAGGCGTTGCCCCTCCGGTGACCATAAGGACCGCAGTACCTGTATTCTCTGCACCACCCCTTCCACCACCCGGTGCACTCTCTCATCCACCAATGCGGGCTCCTCCTTTGCGAGCCGCCCCTCCGGTCACTATTCAGCAAGCTGTTCCTGTATTTTCTGCTAAAGACAAACCTGTTACTGATCCACCAGTTCAAAAAGATGAACCACTCATTGCTCTGCCAGTCCAAAAAGACGAACCGATCATTGCTCCGAAAGACGATTCGCCGAACATCACAACCACAAGCATTACTCCAGTTAGCCAAGAAACCAAACAAGAGGCGAAAGCCGAGGAGACAGATGCTGCCGTTCCACCGGAATCCGAGACATTGCCGAGCTTGGAGCAGCTGAAGATTTGA 1299 0.5212 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFESPHYCSTLRQAEHSAAEVALNSLSHRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFTGTVELADITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIARALLNYRQKEKMAMSHPDASIPFPKKFQIQSPRPTSPQSRPAAASKILPLIFPRTSSRSRPSFATPNESSRSRPAVVTTASGESSMISPPSSMLESRVNRRPRFPAAGAAPYVPIGQMRLPCRGVAPPVTIRTAVPVFSAPPLPPPGALSHPPMRAPPLRAAPPVTIQQAVPVFSAKDKPVTDPPVQKDEPLIALPVQKDEPIIAPKDDSPNITTTSITPVSQETKQEAKAEETDAAVPPESETLPSLEQLKI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00152 432 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Adu03g00152 432 SUPERFAMILY dsRNA-binding domain-like 88 159 - -
Adu03g00152 432 SMART DRBM_3 2 69 IPR014720 -
Adu03g00152 432 SMART DRBM_3 88 154 IPR014720 -
Adu03g00152 432 Gene3D - 2 83 - -
Adu03g00152 432 Pfam Double-stranded RNA binding motif 88 153 IPR014720 -
Adu03g00152 432 Pfam Double-stranded RNA binding motif 2 68 IPR014720 -
Adu03g00152 432 MobiDBLite consensus disorder prediction 356 432 - -
Adu03g00152 432 MobiDBLite consensus disorder prediction 189 276 - -
Adu03g00152 432 MobiDBLite consensus disorder prediction 234 274 - -
Adu03g00152 432 SUPERFAMILY dsRNA-binding domain-like 2 68 - -
Adu03g00152 432 MobiDBLite consensus disorder prediction 388 404 - -
Adu03g00152 432 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 87 155 IPR014720 -
Adu03g00152 432 CDD DSRM_AtDRB-like_rpt2 86 154 IPR044451 GO:0003725
Adu03g00152 432 Gene3D - 84 155 - -
Adu03g00152 432 CDD DSRM_AtDRB-like_rpt1 1 69 IPR044450 GO:0003725
Adu03g00152 432 PANTHER - 1 408 - -
Adu03g00152 432 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 2 1 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00152 Adu-Chr3 1460603 1463606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00152 - - gmx:100816445 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01346 08 22670659 22674757 Adu03g00152 03 1460603 1463606 PCT