Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00069 ATGGCTCCGATTCCGTCAGAGAACGGTGTAGATGGAGACGACGAGAGAGAAGAAGAGGAAGAGGAAGAAGTTGAAGAAGACGAAGAAGAGGAGGAGGAAGAAGAAGATGAAGAGGAGCCACGGCTTAAGTACCAGAGAATGGGAGGGAGCATACCTACGATGCTTGCCACCGATGCTGCGTCATGCATCGCCGTCGCCGAGCGGATGATCGCGCTCGGCACTCAGGGCGGCACTGTTCACATCCTCGATTTTCTCGGCAATCAGGTGAAAGAATTTGCCGCCCATGCTTCCGTTGTCAACGACCTTAGCTTTGACATAGAAGGGGAATTTATTGGAAGCTGTTCTGATGATGGATCAGTTGTTATAAACAGTCTCTTCACCGATGAGAAAATGAAATTCGAGTACCAACGACCAATGAAAGCGATTGCATTGGACCCAGAATATGCAAGGAATGCGTCTAGGAGATTTGTTGCTGGTGGTTTAGCAGGTCATTTGTATTTAAATTCGAAGAAATGGTTGGGCTATCGTGACCAGGTTTTGCATACCGGGGAAGGCCCAATACATGCTGTGACATGGAGAACAAGTCTTGTTGCTTGGGCAAATGATGCAGGGGTGAAGGTTTATGATACTGCCAATGACCAGCGTATAACATTTATCGAAAGACCGCGAGGAAGCCCACGTCCTGAGCTTCTGCGTCCTCACTTGGTTTGGCAGGATGACACCCTCTTGGTTATTGGCTGGGGAACATCTGTGAAAATTGTTTCTCTAAGGACAAATAACCATAAAGCAGCCAATGGGACATACAGGCAAGTTCCTTTGTCTGGTATGGTACAGGTTGATATTATGGCATCCTTTCAGACTGGCTATTTCATATCAGGCATTGCCCCCTTTGGTGATGTATTGGTAGTTCTAGCTTATATTCCTGGAGAGGAAGATGAAAATAAGGATTTTAGTAGTACCGCTCCTTCGCGGCAGGGCAATGCACAAAGGCCAGAAGTTAGAATAGTATCATGGAATAATGATGAACTTTCAACTGATGCTCTACCGGTACATGGGTTTGAGCATTACAAGGCGAAAGACTATTCTCTTGCTCATGCTCCTTTCTCAGGTAGCAGCTATGCTGGTGGTCAGTGGGCTGCAGGTGATGAACCACTTTACTATATTGTATCCCCAAAAGATGTAGTTATTGCAAAGCCAAGGGATACGGAAGATCATATTGCTTGGCTTCTTCAGCATGGGTGGCATGAAAAAGCTTTGGCTGCAGTTGAATCTGGTCAGGGACGCAGTGAACTACTTGATGAGGTAGGATCGAGGTACCTAGATCATTTGATTGTGGAACGAAAATATGGTGAAGCAGCTTCTCTATGTCCCAAGTTGCTGCGAGGATCAGCTTCAGCATGGGAGAGATGGGTATTTCACTTTGCCCACCTTCGTCAACTCCCTGTTTTGGTTCCTTACATGCCAACAGAAAACCCTAGACTACGTGATACTGCTTATGAGGTTGCCCTTGTGGCATTGGCTACAAATGCATCTTATCATAAGGATCTCTTGTCCACTGTGAAATCATGGCCATCTGTAATTTATTCTGCGTTACCTGTAATTTCAGCCATTGAACCTCAGCTCAATACTTCATCCATGACCGATTCGCTCAAGGAGGCATTGGCAGAGTTGTATGTTATTGCTGGGCAATATGATAAAGCATTTTCATTTTATGCTGATCTTATGAAACCAGAACTCTTTGATTTCATTGATAAATATAACCTACAAGATTCAATCCATGAAAAGGTTGTCCAATTGATGATGTTGGATTGCAAGCGTGCAGTTCCTTTATTGATCCAGCATAGGGACTTAATAAGTCCACAAGAAGTTGTGAAGCAACTTCTAAATGCTGATGTTAAGTGTGACTGCAGATACTTTTTACATTTGTATCTCCATTCACTATTTGAAGTAAATCCGCATGCTGGGAAAGACTTTCATGATATACAGGTAGAACTCTATGCAGATTATGATCCAAAGATGCTGCTACCTTTTCTACATAGCAGCCAGCACTATACTCTTGAGAAGGCCTATGAAATTTGCACTAAAAAAGAGCTACTGAAGGAGCAAGTTTTCATCTTAGGAAGGATGGGAAACTCAAAGCAAGCCCTAGCAGTTATTATAAATAAACTGGGGGACATTAAGGAGGCTGTAGAGTTTGTCACTATGCAGAATGATGATGAACTCTGGGAAGAATTAATCAAGCAATGCATTGACAAGCCTGAAATGGCTCAGGGATCGGCTGGTTAA 2286 0.4392 MAPIPSENGVDGDDEREEEEEEEVEEDEEEEEEEEDEEEPRLKYQRMGGSIPTMLATDAASCIAVAERMIALGTQGGTVHILDFLGNQVKEFAAHASVVNDLSFDIEGEFIGSCSDDGSVVINSLFTDEKMKFEYQRPMKAIALDPEYARNASRRFVAGGLAGHLYLNSKKWLGYRDQVLHTGEGPIHAVTWRTSLVAWANDAGVKVYDTANDQRITFIERPRGSPRPELLRPHLVWQDDTLLVIGWGTSVKIVSLRTNNHKAANGTYRQVPLSGMVQVDIMASFQTGYFISGIAPFGDVLVVLAYIPGEEDENKDFSSTAPSRQGNAQRPEVRIVSWNNDELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDTEDHIAWLLQHGWHEKALAAVESGQGRSELLDEVGSRYLDHLIVERKYGEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVALVALATNASYHKDLLSTVKSWPSVIYSALPVISAIEPQLNTSSMTDSLKEALAELYVIAGQYDKAFSFYADLMKPELFDFIDKYNLQDSIHEKVVQLMMLDCKRAVPLLIQHRDLISPQEVVKQLLNADVKCDCRYFLHLYLHSLFEVNPHAGKDFHDIQVELYADYDPKMLLPFLHSSQHYTLEKAYEICTKKELLKEQVFILGRMGNSKQALAVIINKLGDIKEAVEFVTMQNDDELWEELIKQCIDKPEMAQGSAG 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00069 761 Pfam Region in Clathrin and VPS 612 754 IPR000547 GO:0006886|GO:0016192
Adu03g00069 761 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOG 1 756 - -
Adu03g00069 761 SMART CLH_2 611 758 IPR000547 GO:0006886|GO:0016192
Adu03g00069 761 Gene3D Tetratricopeptide repeat domain 643 757 IPR011990 GO:0005515
Adu03g00069 761 Coils Coil 10 39 - -
Adu03g00069 761 MobiDBLite consensus disorder prediction 1 45 - -
Adu03g00069 761 SUPERFAMILY WD40 repeat-like 57 261 IPR036322 GO:0005515
Adu03g00069 761 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 611 758 IPR000547 GO:0006886|GO:0016192
Adu03g00069 761 PANTHER VACUOLAR PROTEIN SORTING VPS41 1 756 IPR045111 GO:0006623
Adu03g00069 761 PIRSF Vps41 1 758 IPR016902 GO:0034058|GO:0046907
Adu03g00069 761 SMART WD40_4 173 209 IPR001680 GO:0005515
Adu03g00069 761 SMART WD40_4 85 124 IPR001680 GO:0005515
Adu03g00069 761 Gene3D - 8 279 IPR015943 GO:0005515
Adu03g00069 761 MobiDBLite consensus disorder prediction 11 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00069 Adu-Chr3 631838 639259 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00069 K20184 - gmx:100804340 1344.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00069 03 631838 639259 Adu03g00069 03 631838 639259 ECH