Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00056 ATGGGTGAGTTTGATTCGCAGCCGAAGTTCATGATCCCAGAGAGAATCCAGGGGGTGAGTTATGACATAGCTGGGCAGATAAAGATGATATGGGAAGTGATGAAAGCGCCATTGATAGTGCCAATGCTGAAGCTTGGAGTGTACATTTGCCTTGCAATGTCGCTGATGCTGTTCATGGAGAGACTATACATGGGAATCGTCATCATCTTGGTCAAGCTCTTCTGGAAGAAACCAGAGCAGCGTTACAAGTATGAACCCATCCAAGATGATCTTGAACTTGGAAGCTCCAATTTCCCTGTAGTTCTCATTCAGATTCCAATGTTCAATGAGAAAGAGGTATACAAGGTGTCAATTGGTGCAGCTTGTAATCTTTCATGGCCTGCTGATCGTCTTGTCATCCAAATTCTTGATGATTCTACTGACCCTGCAATCAAGCAAATGGTGGAGATGGAATGCCAGAGATGGGGAAGTAAAGGCATAAACATAACATACCAAATAAGAGAAAACAGAACAGGATACAAAGCAGGTGCACTTAAAGAAGGTTTAAAGCGTAGCTATGTCAAACACTGTGAATACGTTGCAATATTCGATGCTGATTTCAGGCCTGAACCTGATTTCTTGAGAAGAGCCATTCCCTTCTTGATTGGCAATCCTGACATAGCTCTTGTTCAAGCTCGTTGGAGATTTGTGAATGCGGACGAGTGTTTGTTGACAAGAATGCAAGAGATGTCGTTGGATTACCATTTCACGGTGGAGCAAGAAGTTGGGTCAGCAACACATGCTTTCTTTGGTTTCAATGGGACAGCGGGTGTATGGAGAATAGCAGCAATTAATGAGGCTGGTGGCTGGAAAGATAGGACCACTGTGGAAGATATGGACCTTGCTGTTCGTGCTAGTCTTAGGGGCTGGAAATTCTTGTACCTTGGTGACCTTCAGGCCAAAAGTGAGCTTCCAAGTACTTTGAGAGCCTTTAGATTCCAGCAGCACCGTTGGTCTTGTGGTCCTGCTAATCTCTTCCGCAAAATGGTCATGGAGATAGTAAGAAACAAGAGAGTGAAGTTTTGGAAGAAAGTATACGTGATATACAGCTTCTTCTTTGTACGTAAGATCATAGCTCACATGGTGACATTCTTCTTCTACTGTGTGGTGCTTCCCCTGACAATTCTGGTCCCTGAGGTTCATGTTCCGATTTGGGGTGCTGTTTATATTCCTTCCATCATCACCATCCTCAATTCAGTAGGAACACCGAGGTCCATTCACTTGTTGTTCTATTGGATCCTTTTTGAGAATGTCATGTCTTTGCACCGAACCAAGGCTACATTTATTGGTTTGCTTGAAGCTGGCAGAGCCAATGAATGGGTTGTTACTGAAAAACTTGGAGATTCTGTCAACAACAACAAGAACAAAACAGCAGGAGATGCTGCTAAGAAGACTAATGCCAAATCCCCCAAAAGAACTAGATCCAAATTTGTCGAAAGACTTAATACATTGGAGCTGGGATTTGCAGCATTCCTCTTCATATGTGGATGCTATGATTTTGTGCATGGCAAAAACAATTACTTCATATACCTCTTCCTTCAGACCATAACATTCTCCATTGTAGGATTTGGCTATGTTGGCACCATTGTGTAA 1632 0.4301 MGEFDSQPKFMIPERIQGVSYDIAGQIKMIWEVMKAPLIVPMLKLGVYICLAMSLMLFMERLYMGIVIILVKLFWKKPEQRYKYEPIQDDLELGSSNFPVVLIQIPMFNEKEVYKVSIGAACNLSWPADRLVIQILDDSTDPAIKQMVEMECQRWGSKGINITYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRAIPFLIGNPDIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKRVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDSVNNNKNKTAGDAAKKTNAKSPKRTRSKFVERLNTLELGFAAFLFICGCYDFVHGKNNYFIYLFLQTITFSIVGFGYVGTIV 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00056 543 SUPERFAMILY Nucleotide-diphospho-sugar transferases 96 380 IPR029044 -
Adu03g00056 543 PANTHER BNAC09G36340D PROTEIN 7 543 - -
Adu03g00056 543 Pfam Glycosyl transferase family group 2 192 400 IPR001173 -
Adu03g00056 543 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 318 IPR029044 -
Adu03g00056 543 PANTHER - 7 543 - -
Adu03g00056 543 CDD CESA_CaSu_A2 99 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00056 Adu-Chr3 489444 493414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00056 7 543 Miscellaneous Gene Families AT5G22740 82.189 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00056 K13680 - gmx:100802752 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00056 03 489444 493414 Adu03g00056 03 489444 493414 ECH
Adu02g02751 02 93298698 93305732 Adu03g00056 03 489444 493414 ECH