Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00049 ATGGTTTTGGTTCTAACTCCTTCTTCTTCCTCTGTTTGTCTTCTCCGTCACAGTCCCCCAAGGTACGGCGCCGTTCGATGCTCCTCCAGCGTGCAGGAGATACAGAAGCCTCCCGGAGAAGGGCTCAGCTCGGATCTCCGGGCATTGGAGCCGTTGCCTCCGTTAAAGGTAGCGAAGAGGGTTGTTCTGGTGAGGCATGGGCAGAGCACGTGGAATGCAGAGGGGAGGATCCAAGGGAGCTCTAACTTCTCTGTGCTCACCAAAAAGGGCGAGTCTCAGGCCGAGACTTCCCGCCAGATGCTCATTGATGACAACTTCGACGCTTGCTTTGCAAGTCCTTTGGAACGGTCCAAGAGAACAGCGGAGATCATTTGGGGAGGACGTAAAGAATCAATAATTCCAGAGTATGAATTGAGGGAGATTGACTTGTACTCATTTCAAGGTCTGTTGAAGAATGAGGGGAAAGAGAGATATGGTTCTGCTTATCGTCAATGGCAGCTGGATGCTGCGAATTTCATCATCGATGGTCATTATCCGGTGAGAGAGCTATGGGAACGTGCTAGGAACTGCTGGACTAAAATCTTAGCACATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCCGTTAATCAGGCTCTTGTTGCTACAGCAATTGGTTTAGGGGTGGAGTATTTTAGATGTTTACTTCAGAGCAATTGTGGTGTAAGTGTGCTGGATTTCATTCCTAGGCCTGAGGGCGGATCTCCGGACATTTGCCTCGATCGCTTAAATCAGACCCCTGGTTCACCAGTGGCTGGTGGAAAATCTGGAGGCAGAGATACAAATAAGCGGATCATACTTGTTTGTAATGGATCTACGCAGGGAAATACGGAGAATGATTTTCCGTTTGCTGGTGATCATCCAATGAACATGCTTGGTGTTATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGAAAGTGAGTTCCATAATTAGTAGTCCTAACAAGGCTTGTTTTGAGACTGCCATGACCATCTCCAAGGTACAAGAAGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCACGCTATGTTGAGTTGAAGCAAATCGGTAGCCTAGATGTTGAAACAATCTTTCAGCAATCCAAAATGGATCTATCCAACTTTCCCCCAATTCAGCCTGGATGGTTAAATAGGATTGATGATGGGTTGAGAACAACATTATGGGATCAATCTGAAAAGGCATGGCAGTCCCTGTTAGATGAAATATCCGATGAATCGAGCGAAGGAGTCTTGGTCGCGGTTGCTCATCCAGCAATCCACATAGCACTAATGGGGCACTGCCTTAACTTGACCAAGGAATGGTTAGGGTCATTTCATCTTGACGAAGGGAGTGTTAGTGTCCTTGACTTCCCTGATGGCCCTAAAGGAAGAGGTGTCATACGGTGCATAAATTATACTGCACATTTGGGGAGATGGTCCATCCCTATCACAAGATCAACAGAGGATGGTGAAGAGTTTTAA 1509 0.4712 MVLVLTPSSSSVCLLRHSPPRYGAVRCSSSVQEIQKPPGEGLSSDLRALEPLPPLKVAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDNFDACFASPLERSKRTAEIIWGGRKESIIPEYELREIDLYSFQGLLKNEGKERYGSAYRQWQLDAANFIIDGHYPVRELWERARNCWTKILAHDSRSVLVVAHNAVNQALVATAIGLGVEYFRCLLQSNCGVSVLDFIPRPEGGSPDICLDRLNQTPGSPVAGGKSGGRDTNKRIILVCNGSTQGNTENDFPFAGDHPMNMLGVIQSQKSAELLLDLKVSSIISSPNKACFETAMTISKVQEAADCLGADCVPRYVELKQIGSLDVETIFQQSKMDLSNFPPIQPGWLNRIDDGLRTTLWDQSEKAWQSLLDEISDESSEGVLVAVAHPAIHIALMGHCLNLTKEWLGSFHLDEGSVSVLDFPDGPKGRGVIRCINYTAHLGRWSIPITRSTEDGEEF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00049 502 CDD HP_PGM_like 60 241 IPR013078 -
Adu03g00049 502 SUPERFAMILY Phosphoglycerate mutase-like 277 490 IPR029033 -
Adu03g00049 502 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 63 72 IPR001345 GO:0003824
Adu03g00049 502 SUPERFAMILY Phosphoglycerate mutase-like 59 245 IPR029033 -
Adu03g00049 502 Gene3D - 59 245 IPR029033 -
Adu03g00049 502 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 25 502 - -
Adu03g00049 502 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 25 502 - -
Adu03g00049 502 Gene3D - 271 489 IPR029033 -
Adu03g00049 502 CDD HP_PGM_like 278 477 IPR013078 -
Adu03g00049 502 Pfam Histidine phosphatase superfamily (branch 1) 279 469 IPR013078 -
Adu03g00049 502 Pfam Histidine phosphatase superfamily (branch 1) 61 242 IPR013078 -
Adu03g00049 502 SMART PGAM_5 278 439 IPR013078 -
Adu03g00049 502 SMART PGAM_5 60 214 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00049 Adu-Chr3 445077 448203 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00049 K22200 - gmx:100798495 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00049 03 445077 448203 Adu03g00049 03 445077 448203 ECH