Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00012 ATGGACAAAAAGGTCAAGTGGAGCTGGACCTCCGCGCTTATCGGAGCGGCATCAGCGGTGGCAGCCACGGCGGTGCTCTCAGCGAAGCCCAAGGACCCCACCTTCCACCTTATCTCCATCAACTTCACATCTTTCAAGCTCAGCCTTCCAACCATCCTCGATGCAGAACTAGTCCTCACCGTCCATGTCACCAACCCCAACATCGCACCCATTCACTACTCCTCCACCGCCATGTCCATATTCTACAAGGGATCCCTCCTCGGCTCCGCCGCTGTAGCTGCCGGCTCCCAGCCCCCACGCTCCTGCCAGCTCCTCCGCCTCCCTGCGCGCCTCCGCGGCCTGGAGCTCGCCCAGCACGCCAAGTGCTTCGTCGCTGACGTGGCCAGGCGGGAGATGGTGCTTGACGCCGCCGTGGATATCAGCGGCACCGCCAGGGTGCTTTGGTGGGACCACAATTTTAAGGTGCACGTTGACAGCCACGTTACTGTCGATCCTGTGTTCCTTGATGTCATTGATCAGGAAAATACTTCGGAACTTGAACTTTTTGCCGCTTAA 555 0.5892 MDKKVKWSWTSALIGAASAVAATAVLSAKPKDPTFHLISINFTSFKLSLPTILDAELVLTVHVTNPNIAPIHYSSTAMSIFYKGSLLGSAAVAAGSQPPRSCQLLRLPARLRGLELAQHAKCFVADVARREMVLDAAVDISGTARVLWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELELFAA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00012 184 Pfam Late embryogenesis abundant protein 60 157 IPR004864 -
Adu03g00012 184 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 3 171 - -
Adu03g00012 184 Gene3D - 13 166 - -
Adu03g00012 184 SMART why 40 156 IPR013990 GO:0009269
Adu03g00012 184 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 3 171 - -
Adu03g00012 184 SUPERFAMILY LEA14-like 21 162 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00012 - - adu:107476511 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00012 03 182399 182966 Adu03g00012 03 182399 182966 ECH