Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00007 ATGTCTACCGCCTCATTCAGTACGACATATCCGGCGCCCCCTTTGGATCTCGCCTCGCCGGACTCAATCACCACGCCACATCCCTCCACTTCTCTCCGCACGCCGATCTCTCTCGCACAGTACTTCTCATTCCTCTTCGCGAGTTCAACATCTCCTTCGTCAAAGTATCCTGTTTATTTTGCTTTTGAGGATGACAACATTAATGCTGTGTTAGCTGATATCAAGAAGAGTGATATCACTGGTCAACCAGCTACTGCAACTACTGGCGGATACAAATTTGTTGTTTCAGCTCTAGAACCAAAGAGTCTTGTCTCTCCATCCATTACCAACATTCAGGGGTGGTTGACAGGACTGAAGGCAGGTGATGATGCACATCAATTACCCACCATCGCAATAGTGGCATCATATGACACCTTTGGAGCTGCTCCTGCATTATCAGTGGGAAGTGATAGTAATGGAAGTGGTGTTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTTTCACTTTTGTATTCTAATCCAAAGACCAGAGGTCAATACAATCTGTTGTTTGGGCTAACATCTGGTGGGCCTTACAACTACAATGGAACTCGTAAGTGGCTTCGGAGCTTTGATCAACGATTGCGTGAAAGCATTGACTATGCTATTTGCATAGATAGTATTGGCTCCTGGGAGAATGAATTGTGGATTCATGTGTCTAAGCCTCCAGAAAATTCCTACATTAAGCAAATCATGGAAGATTTTTCAAGTGTTGCAGAAGAGTTGGGCTTTAATGTGAATTTGAAGCATAAGAAAATAAATATCTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGTTGAGAGTTACTGCTGCCACTCTTTCTGAACTTTCGGCTGCACCTGAACTGCTAGAAAAGACTGGTGGTTTGATTGACAGCAGGCATTTTGTAGATGAAAAGGCAATTATCAGAGGTGTGAAATTAGTTGCTGAGAGTCTTGCACGGCATATTTACGGACATCAAGGAAAGAACATCCAAATCTTTGCAGACAACAGTAACTTGGCTGTAAATCCTTATTATATCCGATCATGGTTAGATGTTTTGTCCCAAACACCTCGAGTGGCACCATTTTTCTCGAAAGATGATCCTTTTGTCATGGCTCTGAAAAAGGAATTAGAAGATCATACAGATGAGGTCAATCTGCAACGTGAAGCTCTAGATGGGATGTTCACATTTTATGATTCTACTAGCGCAAAGCTGAACATATATCAGGTTGCCAGTGTCACATTTGACTTGTTATTGCTTCTAGTACTGGGGTCGTATTTAATTGTGCTCTTCAGTTTCTTGGTCATCACAACTAGGGGTCTTGATGATCTGATCAGTTTATTTCGGCGGCCTCCCTCGCGAAAAGTGAAGACTGCATAA 1410 0.4291 MSTASFSTTYPAPPLDLASPDSITTPHPSTSLRTPISLAQYFSFLFASSTSPSSKYPVYFAFEDDNINAVLADIKKSDITGQPATATTGGYKFVVSALEPKSLVSPSITNIQGWLTGLKAGDDAHQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSFDQRLRESIDYAICIDSIGSWENELWIHVSKPPENSYIKQIMEDFSSVAEELGFNVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLEKTGGLIDSRHFVDEKAIIRGVKLVAESLARHIYGHQGKNIQIFADNSNLAVNPYYIRSWLDVLSQTPRVAPFFSKDDPFVMALKKELEDHTDEVNLQREALDGMFTFYDSTSAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00007 469 CDD M28_nicalin_like 42 335 - -
Adu03g00007 469 Pfam Nicastrin 130 267 - -
Adu03g00007 469 PANTHER NICALIN 54 468 IPR016574 GO:0009966|GO:0016020
Adu03g00007 469 ProSitePatterns EF-hand calcium-binding domain. 150 162 IPR018247 -
Adu03g00007 469 Coils Coil 380 400 - -
Adu03g00007 469 SUPERFAMILY Zn-dependent exopeptidases 103 329 - -
Adu03g00007 469 PANTHER NICALIN 54 468 - -
Adu03g00007 469 MobiDBLite consensus disorder prediction 1 29 - -
Adu03g00007 469 Gene3D Zn peptidases 57 323 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00007 56 469 EF-hand Containing Proteins AT3G44330 78.986 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00007 - - gmx:100779713 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00007 03 74033 82516 Adu03g00007 03 74033 82516 ECH