Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02749 ATGGATATCAGAGAAATGAATAATAAAAAAGATCAACAAGTTGAGACTCGTTGGGTTCCCACTACTCCCATAAAACCCATTCTTCAAACAATGCCGATCTACGCACCAGAACAGGAAGATCAGCCCCAGATACCCACTCATGGTGATGGAGCAGTTGCATGTTCCAAATTCACAAGTTTTATGGAAAGGTCCTGTATTGGGTCAGTAAATGAAGGTAGAATGAAAAACATTGTTGGTGAAAATAGTGAAGCTTGTGCAAAGACAGTATCTGGTGATCTTCCTGGACTTGGTCATATGAGTTTTTCTCAACTTATAGCGACCATGCAAGAGAATGCAACATCAGCTAATTTGAATGCAACCCAATCAGGCAATGGATCGATGAATCCAGCTTTTTCTTCATTGGATTCACAGATCAACTACAACAGAGCAGCCATGAATAACACTGGAAATCTTCAGGGCACATCGTCAGTTGGTTGCTCACAAATTGCATCATTGTCAATGAATATGGAAAAAAATAATCCTGCCGAAGAATTTGATGTTGCTTGCACACCAGTAAAGATGGATGCCATCCAGATAGAAAACACACCACAATCAAAACAAAAGAGAAGAAAGCACCGTCCCAAGGTCATTGTAGAAGGCAAGCCAAAACGAACTCGAAAGCTAGCTGAAGAAAAGAATGTTCAGCTCAAAGAAAATTCAACTGGCAAAAGAAAATACGTGAGAAGAAAAGGAATAAACAAGACCCCTACTACTCCAGCAGAAGAAACAATTAAAGACTTGACGCCAGACTCTACAAAAAAGTCTTGTAAAAAGACTTTATTTGATGGATTTACTGGCACTGAAAATGCAACAGCAGAAGGGACAGCAAGTTGTGACAAAGAAGCACAAGATCCGTCGCAAAGCAATCCTCCCGTAGCACAACCAATAGAAAAGACGATCAAGAAGAGGGGTCGGAAGAAGAAAACGCCCAACATGTCTTATCCAACAGAGACCACAGTAGAATTCAGTGAAGCATTAAGACGTGGACCTAACACAAGATCAAGAAGTAATAAGAAATCCAAAGAAGAAAGCTCTACAAGTGGAAATTTTTACATAGAATTACCCATCGGCACACAAGATCATAACACATCCGCTAAGAGGATGAGATATAGCAGAACAAATGCAACAAATAAGGTATCATATGATCATGAGCGATCAACTGAAGATATCAAAACGTCAAGTATATTTTCTCCAGAAAGCACTTCGCAGGAGACAAAGCCCATTGTCAATTGCAGCTTTGAAGATAACAAAAACAAAAGAGATCAGACAACTGAAAATGCAGAGAGTCCAAATACGAGTGGCAGGAATATCATTGGGGTACATCATAATGATTTGTCTTTGTACAGAACGAAATCTAAAACAGCGAGTACTTCTGCCGCAACTAATCAAAATGAAGTAGAAATGACAATTTCTCCGCAAGATGCGCGCAGACTTGATTACGCATCCAATTCTGACAACTCTGAATGTAATTCTGATTTTTACAAGTTCATCTCAATGGTGCGAAGTTTGGAAGCAGTGGACAAATCATTAGATATTTCTGATGTAGATGCTATAACAAAGCAATTTAAAAAATTGAAAATCAAAACACAAGAGGATGCAATAATAAGGTATAAACAAAAAAAACAAAAACAAAAGCAAAAGCGTCTTGATGGCGCCATCATTCCGTTTGAAGGCCAAGTTGTTCCTTTCAAGAAACAATATCCACGCGCTAGGGTTAACCTTGATGAAGAAACTAATAGAGTGTGGAAGCTTTTGATGTTGGATATAAACAGCCATGGAATTGATGGAGAAGATGAAGACAAGTCCAAATGGTGGGAAGAAGAGCGAAATGTATTTCGAGGGAGGGCAGACTCGTTTATTGCAAAAATGCATCGTGTACAAGGAGACAGACGCTTCTCTCGCTGGAAAGGATCAGTGGTGGATTCGGTGGTGGGGGTCTTCCTCACCCAAAATGTCTCAGACCATCTCTCAAGTTCTGCATTCATGGCCCTGGCGGCTCGATTCCCTAACAAATCACAAGTGAATGTTGGGGCGCCAGTAGAGATCTCAGAGGGGGATGCGCCGTTGAATCCACCCGTTCATGACGCCACTGAGCATTCTGGACACAAGATAACACAGTGGAGTGTCCCAGAAATGACTCAGAGAACGGGGTTTAATGATATGGTGGCATCCCGAAGCTCTGGGGTTTCCCAAACTGGCGAAGCTTCAAATGGGCAGAACGATGAGAAGATGGGATCCTGTTCGGGGGGCCACTCAGAAGTGGAGAAGAACACTTCTGTCAATATCACCCAGCAGGCAGAAAATTCAACCAAGGTTCAGGAAGAAGCTGACACAAAAAGAGATGAAGCAACTGAGAAGCTAACATCTGGGGACCTGAAGAATGGCAGCCCCAAAGAAAATAGTCAGGTCCCCCTCAGAGCATCCACCTTCCCAACCCAGGAATCCGTCCTCAGCTCAGAAAATGAAAAGAGCATGCCTTGCTGCCCAGACAACGGAGCTGAAATGTCTCAAAGGTCTCACTCTCAAAGGATTGTGGCTCCAGCACAGGCAACTGCTGGTGCCCACAAAAGTGAAGCAAGCAATGAGGCCCGAGAGACAAGTTCAGCAAAAAAAGACAGCAAGGGCAAAGGAAAAGAGCAAAAGGACGAAATCAACTGGGATAGCTTGCGAACAGCCGCGCAAGCTATAGCAGGGAAGAGAGAGAAGACATGGAACACCATGGATTCTCTCGACTGGGATGCTGTGAGATGTGCAGATGTTAGCACAATCTCAGATGCGATCAAAGAAAGGGGCATGAACAACAGGCTCGCTGAACGCATTCAGCTCTTCCTGAATCGGCTGGTTGAAGATCACGGTGATATTGACCTAGAGTGGCTGAGAGACGTCGCCCCGGACAAAGCAAAGGAGTTTCTGCTCAGTATAAAGGGACTGGGACTGAAAAGTGTGGAGTGTGTGAGGCTCCTAACCCTGCACCACCTTGCCTTTCCTGTGGATACCAATGTTGGAAGAATAGCAGTAAGACTTGGATGGGTACCGCTGCAGCCACTTCCTGAGACACTACAGTTGCACCTCCTGGAACTGTACCCCATTTTGGAGACCGTACAAAAATATCTGTGGCCTCGTCTGTGCAAACTAGATCAAAAAACATTATACGAGCTACATTACCAGATGATTACATTTGGAAAGGTCTTCTGCACAAAACACAAACCAAATTGCAATGCATGTCCATTGAAAGGGGAGTGTAGACACTTTGCTAGTGCTTTTGCAAGTGCAAGACTTGCCTTACCAGGGCCAGCGCAGACAAGTATAGTCAGTACCTCCGGAAACAATCCGACAGATCAGAATCCAACGGATCAAAATCCGATGGATCAGAACCCGATGGATCAGAATCCGGCGGTAAACATCGCTCAGTTGCACTTGCCCCTTCTTGAGAATCCAAACCAAGGAGCAGAAATTCTACAAGCAGAAGTTGCCAAACAGCTAAAATCAATATCTGAAAAGAATATCTGCCATCCTATTATTGAAGAGCCAACAACCCCAGAGGCAGAATGCTCACAAGTACCAATTCATGATATTGAGGATGCCTTCTGGGAGCCACGGGAAATTCCTCCCATCGACCTTGATCTAGAGGAGTTTACCCTGAATTTAAAAAATTATATGCAAGGAAATATGGAACTTCAAGAAGCGGAAATGTCAAGGGCATTGGTAGCTTTGACTCCAAAAGCTGCTAACATTCCTATGCCTAAGTTAAAGAATGTGAACCGATTACGGACAGAGCATTGCGTTTATGAACTCCCAGATACGCATCCTCTTCTGGAAGGGTGGGACAAACGAGAGGCAGATGATCCAGGCAAATATCTTCTTGCTATATGGGCTCCAGGGGAGACAGCAAATTCTATACAACCACCTGAAAGAAAATGCAGCTATCAAGAAAGTGGCCAACTCTGTAATGAGAAAGAATGCCTTTCCTGCAACAGTGTTCGGGAAGCAGATTCGCAAACAGTTAGAGGGACAATCCTGATACCGTGTCGAACAGCTATGCGAGGAAGATTTCCGCTAAATGGCACCTATTTCCAAGTCAATGAGGTATTTGCTGACCATGAATCGAGTAAAAATCCAATCAGCGTTCCGCGAAGTTGGATCTGGAACCTGAACAGGCGAACAGTATATTTTGGAACCTCTGTAACATCAATATTTAAAGGTTTAACAACGCCTGAAATTCAACAATGCTTCTGGAGAGGTAAGATTCAGTTCCCAAAATGTATCCTGCTTTGCATAATTCAATAA 4326 0.4341 MDIREMNNKKDQQVETRWVPTTPIKPILQTMPIYAPEQEDQPQIPTHGDGAVACSKFTSFMERSCIGSVNEGRMKNIVGENSEACAKTVSGDLPGLGHMSFSQLIATMQENATSANLNATQSGNGSMNPAFSSLDSQINYNRAAMNNTGNLQGTSSVGCSQIASLSMNMEKNNPAEEFDVACTPVKMDAIQIENTPQSKQKRRKHRPKVIVEGKPKRTRKLAEEKNVQLKENSTGKRKYVRRKGINKTPTTPAEETIKDLTPDSTKKSCKKTLFDGFTGTENATAEGTASCDKEAQDPSQSNPPVAQPIEKTIKKRGRKKKTPNMSYPTETTVEFSEALRRGPNTRSRSNKKSKEESSTSGNFYIELPIGTQDHNTSAKRMRYSRTNATNKVSYDHERSTEDIKTSSIFSPESTSQETKPIVNCSFEDNKNKRDQTTENAESPNTSGRNIIGVHHNDLSLYRTKSKTASTSAATNQNEVEMTISPQDARRLDYASNSDNSECNSDFYKFISMVRSLEAVDKSLDISDVDAITKQFKKLKIKTQEDAIIRYKQKKQKQKQKRLDGAIIPFEGQVVPFKKQYPRARVNLDEETNRVWKLLMLDINSHGIDGEDEDKSKWWEEERNVFRGRADSFIAKMHRVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMALAARFPNKSQVNVGAPVEISEGDAPLNPPVHDATEHSGHKITQWSVPEMTQRTGFNDMVASRSSGVSQTGEASNGQNDEKMGSCSGGHSEVEKNTSVNITQQAENSTKVQEEADTKRDEATEKLTSGDLKNGSPKENSQVPLRASTFPTQESVLSSENEKSMPCCPDNGAEMSQRSHSQRIVAPAQATAGAHKSEASNEARETSSAKKDSKGKGKEQKDEINWDSLRTAAQAIAGKREKTWNTMDSLDWDAVRCADVSTISDAIKERGMNNRLAERIQLFLNRLVEDHGDIDLEWLRDVAPDKAKEFLLSIKGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPETLQLHLLELYPILETVQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKHKPNCNACPLKGECRHFASAFASARLALPGPAQTSIVSTSGNNPTDQNPTDQNPMDQNPMDQNPAVNIAQLHLPLLENPNQGAEILQAEVAKQLKSISEKNICHPIIEEPTTPEAECSQVPIHDIEDAFWEPREIPPIDLDLEEFTLNLKNYMQGNMELQEAEMSRALVALTPKAANIPMPKLKNVNRLRTEHCVYELPDTHPLLEGWDKREADDPGKYLLAIWAPGETANSIQPPERKCSYQESGQLCNEKECLSCNSVREADSQTVRGTILIPCRTAMRGRFPLNGTYFQVNEVFADHESSKNPISVPRSWIWNLNRRTVYFGTSVTSIFKGLTTPEIQQCFWRGKIQFPKCILLCIIQ 1441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02749 1441 MobiDBLite consensus disorder prediction 230 451 - -
Adu02g02749 1441 MobiDBLite consensus disorder prediction 737 899 - -
Adu02g02749 1441 SUPERFAMILY DNA-glycosylase 627 1099 IPR011257 GO:0003824|GO:0006281
Adu02g02749 1441 Coils Coil 540 560 - -
Adu02g02749 1441 Pfam RRM in Demeter 1350 1429 IPR028925 -
Adu02g02749 1441 Gene3D - 978 1105 IPR023170 -
Adu02g02749 1441 MobiDBLite consensus disorder prediction 275 307 - -
Adu02g02749 1441 SMART endo3end 904 1076 IPR003265 GO:0006284
Adu02g02749 1441 MobiDBLite consensus disorder prediction 737 784 - -
Adu02g02749 1441 MobiDBLite consensus disorder prediction 871 899 - -
Adu02g02749 1441 Pfam Permuted single zf-CXXC unit 1316 1347 IPR028924 -
Adu02g02749 1441 SMART ccc3 1077 1097 IPR003651 GO:0051539
Adu02g02749 1441 MobiDBLite consensus disorder prediction 1112 1137 - -
Adu02g02749 1441 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 137 1428 IPR044811 GO:0019104|GO:0035514|GO:0080111
Adu02g02749 1441 MobiDBLite consensus disorder prediction 404 425 - -
Adu02g02749 1441 MobiDBLite consensus disorder prediction 356 390 - -
Adu02g02749 1441 Coils Coil 1222 1242 - -
Adu02g02749 1441 CDD ENDO3c 924 1043 IPR003265 GO:0006284
Adu02g02749 1441 MobiDBLite consensus disorder prediction 785 801 - -
Adu02g02749 1441 MobiDBLite consensus disorder prediction 802 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02749 Adu-Chr2 93273338 93280858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02749 - - aip:107626416 2400.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02749 02 93273338 93280858 Adu02g02749 02 93273338 93280858 ECH
Adu06g01663 06 55560139 55568881 Adu02g02749 02 93273338 93280858 PCT