Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02540 ATGTCGGATTCACCCAGCAAGATCCCTCCTACAACCGAAGTGGACCTTGGTTTTGAGAAGGTTCCTGAGAAGATTGAAGAAGATGGAAAAGTTGCAGGTCCCATGCTCCATTGTGGTAATTGTGATACAGAAGTAGTTCACAAGCTGGCTGAAATGTTCCTTCCAGGATTGGCTTGTGCCTGCGTCGATAACACGACAGGATATCCCTTCTCCACACCTGGTTCAGTGGCAGGTAATTTCAGAAAGGAAATGATAGATTATCTCACACAAAGAAGTGAATCATTTGTTGCTGAGTCTGTTATCTTAGAAGGTGATCCACAAGGTGAAGTATTGGATCATCCGTTTGATATTATTTCTTATTTCGTTGATGAGTTTGTTATTTCAAAGAGGAATCTCGTTAGTCAGGTCTCTGGATGGCTGCTAAGTGATTGGAGAGAAGACAAAGTAGATGATTTTATTCAGGAGATGGAAATGAATGGATTTTGGTCCTTTGATAGAAGAGAAACTATCGCCAAATCTCTGCTTAAGAATGTTGATTTCAAGAATGCATATCACTGCAATGAAAGTTTTCATTCTCAAGAAGATCTTGACAATCATGTTGATGTTTGCAACTTTAGAACTGCATTCTGTCAAAATGAGGGATGTGACGCCATGTTTTGCTCAGCTCATTTTGAGCAGCATGACTCGACCTGTCCTTTCAAGATAATTTCATGTGAACAGAAGTGCTCGGATAGCATTATGAGACGTGATATGGACCGGCACTGCATAACTGTTTGTCCGATGAAGATTGTGAACTGTCCATTTTATGGAGTAGGTTGTAGAGCTGCTGTTGCTCAATGTATGATTGAAAAGCATTGCTCAGACGACGTTAAGACACACTTGATGCACGTGCTTAAAGGCATCCACAGGGAAGCAACTGCTGAAGATCTCAGCCGACGAGTGGAGAAAATTATGCAGGCATCATCAGGCACCAGGTTAGCAGAGGCTCGCGACATGAGAATGTTCAAATCTATTGTCAAGAATCTTGAAGCAAAGGTAGGACCTATGGAAGTAACTCCCAAGAATGAAGATAGTCATGAAAGTAGCACAGAAACACAAGGGCACTGA 1107 0.4182 MSDSPSKIPPTTEVDLGFEKVPEKIEEDGKVAGPMLHCGNCDTEVVHKLAEMFLPGLACACVDNTTGYPFSTPGSVAGNFRKEMIDYLTQRSESFVAESVILEGDPQGEVLDHPFDIISYFVDEFVISKRNLVSQVSGWLLSDWREDKVDDFIQEMEMNGFWSFDRRETIAKSLLKNVDFKNAYHCNESFHSQEDLDNHVDVCNFRTAFCQNEGCDAMFCSAHFEQHDSTCPFKIISCEQKCSDSIMRRDMDRHCITVCPMKIVNCPFYGVGCRAAVAQCMIEKHCSDDVKTHLMHVLKGIHREATAEDLSRRVEKIMQASSGTRLAEARDMRMFKSIVKNLEAKVGPMEVTPKNEDSHESSTETQGH 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02540 368 ProSiteProfiles Zinc finger TRAF-type profile. 227 274 IPR001293 GO:0008270
Adu02g02540 368 Pfam TRAF-type zinc finger 227 285 IPR001293 GO:0008270
Adu02g02540 368 MobiDBLite consensus disorder prediction 350 368 - -
Adu02g02540 368 MobiDBLite consensus disorder prediction 346 368 - -
Adu02g02540 368 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 9 359 - -
Adu02g02540 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 226 292 IPR013083 -
Adu02g02540 368 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 9 359 IPR043211 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02540 Adu-Chr2 91215159 91217895 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02540 - - gmx:100819268 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02540 02 91215159 91217895 Adu02g02540 02 91215159 91217895 ECH
Adu06g00770 06 9292189 9295255 Adu02g02540 02 91215159 91217895 PCT