Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02448 ATGGGAGTGGTAACTGTTGGTGAATTGAAGCCTAGCATTTCAGGAAAAAGAACCTTCCGTCCAAGTTCAAGCATAAGGCATGCCACTGAATGGCCAATTTCTGATGTATCTAGTGATTTTACAATTGAAGTTGGATCTTCTAGCTTTGCACTTCACAAGTTTCCTCTGGTTTCTAAGAGTGGAAGAATAAGGAAACTGCTGTTAGAGGCTAAAGACTCGAAGGTTTCGCGCATAAGTCTGGCGAACGTGCCGGGCGGCCTAGAATCATTCGAGCTAGCTGCGAAATTCTGCTATGGAATCAATCTTGAATTAACACTCTCCAATGTTGCTATTCTAAAATGTGTATCACACTTTCTTGAAATGACAGAGGAGTATGCAGAGAAGAACTTGGAAACAAGAGTTGAATCATATCTAAAAGATACCGTTCTACCTAACACATCAAGCACGATAACCGTGCTTCATCGCTGCGAAAATCTTCTTCCATACTCAGAAGAGATCAACCTTGTTAGCAGGCTAATCAACGCAATTGCGAACAATGCATGTAAAGAACAGCTTACCTCTGGATTGTTGAAATTGGATCATAACTTCCCTTCCAAGACTATTTCTAGCATGGAACCGGAGACGCCGTCGGATTGGTGGGGAAAGTCTCTCAATATTCTTAGCCTTGAATTCTTCCAGAGAGTTCTGACGGCCGTGAAGTCGAAGGGACTAAAACAAGAAATGATCAGCAAGATCTTGATAAATTACGCGCACAATTCGCTTCAGGGGATTGTTAGTATTAGCAAGGATCCTCAATTTTTCAAGGGAAGTTCATCTGACTTGGAGTTGCAAAAGAGACACAGGATAATTGTGGAAGCCATTGTTAGCTTGCTGCCTACGCAATCAAGGAAAAGTCCCGTTCCAATGGCGTTTCTATCCAGCTTGTTGAAGGCTGCAATTGCTGTGTTCGCTTCTTCGTCGTGCAGATCCGATCTGGAGAGAAGGATTGGCCTACAGCTTGACCAGGCAATCCTTGAAGACATACTAATTCCGACAAATTCGCAGCAAAATTTGCAGAACACAGCAATAATGTATGATATAGATTCAATTGTGAGGATATTTTCCATTTTCTTGAACTTGGATGAGGAGGAGGAGGATGATAATCGAATGCGAGACGAAAGCGAAATGGTTTATGACTATGACAGTCCTGGATCTCCAAAACAAAGCTCAATTATTAAGGTTTCAAAATTGTTGGACAATTTTCTAACCGAAGTAGCACTCGATCCGAACTTGTCACCATCCAAGTTTATATCGCTTGCAGAGCTACTTCCAGATCACGCCAGAGTAGTTAGTGATGGTCTCTATAGAGCTGTTGATATCTTCCTTAAGGTTCATCCAAACATAAAGGACTCAGATCGATACCGTCTTTGCAAGGCCATTGATTGTCAGAAACTGACTCAAGAAGCATGCAGCCATGCAGCGCAAAACGAAAGGCTGCCGGTACAAATGGCGGTTCAAGTTCTTTACTTCGAGCAAATCCGGCTGCGAAACGCAATGAACGGAGGACACAACCAGATCTTCTTCGGCGGAGGATTCAACGGCCAGTTCCCTCAACGCTCCGGGAGCGGAGCAGGAAGCGGAGCCATTTCTCCGCGAGACAACTACGCTTCCGTGCGAAGAGAGAACCGGGAGCTGAAGCTGGAGGTTGCGAGAATGCGAATGAGGCTAACTGATTTGGAGAAAGATCACGTTTCAATGAAGCAGGGGCTTGTAAAGACACGCTCTGCAAGCAGGCTATTCAAATCATTGTCAAGAAAACTTAGCAAAATTAATATTCTATTTAGGATATCTAGCATTAAGCCAAATGGTGCTAGTTCAGAAAGCAGATTCCCTTTCCCTAGGAGAAGGCGTCACTCAGTTTCATGA 1905 0.4373 MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDFTIEVGSSSFALHKFPLVSKSGRIRKLLLEAKDSKVSRISLANVPGGLESFELAAKFCYGINLELTLSNVAILKCVSHFLEMTEEYAEKNLETRVESYLKDTVLPNTSSTITVLHRCENLLPYSEEINLVSRLINAIANNACKEQLTSGLLKLDHNFPSKTISSMEPETPSDWWGKSLNILSLEFFQRVLTAVKSKGLKQEMISKILINYAHNSLQGIVSISKDPQFFKGSSSDLELQKRHRIIVEAIVSLLPTQSRKSPVPMAFLSSLLKAAIAVFASSSCRSDLERRIGLQLDQAILEDILIPTNSQQNLQNTAIMYDIDSIVRIFSIFLNLDEEEEDDNRMRDESEMVYDYDSPGSPKQSSIIKVSKLLDNFLTEVALDPNLSPSKFISLAELLPDHARVVSDGLYRAVDIFLKVHPNIKDSDRYRLCKAIDCQKLTQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQIFFGGGFNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQGLVKTRSASRLFKSLSRKLSKINILFRISSIKPNGASSESRFPFPRRRRHSVS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02448 634 Pfam NPH3 family 211 483 IPR027356 -
Adu02g02448 634 PANTHER OS12G0117600 PROTEIN 25 627 IPR043454 -
Adu02g02448 634 Gene3D Potassium Channel Kv1.1; Chain A 24 146 IPR011333 -
Adu02g02448 634 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 627 - -
Adu02g02448 634 ProSiteProfiles NPH3 domain profile. 211 507 IPR027356 -
Adu02g02448 634 SUPERFAMILY POZ domain 22 123 IPR011333 -
Adu02g02448 634 Coils Coil 548 575 - -
Adu02g02448 634 MobiDBLite consensus disorder prediction 615 634 - -
Adu02g02448 634 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02448 Adu-Chr2 90179293 90183156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02448 1 457 EF-hand Containing Proteins AT2G47860 59.305 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02448 - - gmx:100814622 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02448 02 90179293 90183156 Adu02g02448 02 90179293 90183156 ECH
Adu06g00700 06 8325052 8327747 Adu02g02448 02 90179293 90183156 PCT