Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02417 ATGCTCAAGCTCCTCAACACCAAGCTCCGCCGCTTCTTCCTCCTCCGGTGGTGGCCACTACGCCGCCGTAGTTCAAGGTGCAAAGTAGTCATCACAAAGAAGCACAAAAACGACAACCCAAAACCCCAAAACGACCCAAGCTCGAATCTTTCCACCATTTCCGATCAAAACGCCCAAATGGGTACTCAAAAACACGAAAAACCAATTCGCATCGCAACCTTCAACGCCGCACTGTTTTCCATGGCGCCAGCGGTTCCACCTCAGAGAACAGAGAAAGGTCAGAACTTTGACGACCAAAACGGCGTCGCTTCGAGACAACGAAGACCCTTTGACCAAAATTCGAGGCTAAAGTCAACGAACGAGAAACCGAGGAGCATTCTGAAGCGTTCTCATTCTCACTCTCCCCTTCATCATCACATACTCTGTTCTGAAAACAGAGCACTCTGCATCAGCAACAAGCATCAACAACAACCACAACACCACTTTTCGAAATCGAAGCTAAGAGTTTCCATTAATTTACCGGATAACGAGATCTCCATGCTGAGAAATCGCCAACCGAGCTTCTCGGAGCACGAGAAGGTGGTAATTGCGGCGCGAAACGGGTGGCAGAGGAAGACGGTGGTGGAGGTGCTGAAAGAGGTAGGTGCAGATATATTGGGTTTGCAAGAAGTGAAGGCAGAAGAAGAGAATGGGATGAAGCCACTTTCAGATTTGGCCAAAGCATTGGGAATGGATCACTTTGTGTTTGCAGAGAGTTGGGCACCTCAGTATGGAAATGCTGTCTTATCCAAATGGCCCATTAAACGTTGGACTTCCATCAACCTCTTTGATCACTCTGATTTTAGGAATGTTTTGAAGGCTACTATTGATGTACCTCAAGTAGGTGAACTCAATTTTTATTGTACTCACCTTGATCATCTTGATGAGAATTGGAGGATGAAGCAGATAAATGCAATAATTCAATCTAATGATGAGCCTCACATCTTAGCAGGAGGCCTTAATTCATTGGATGAATCAGATTACTCCCAAGAAAGATGGACAGATATTGTTAAGTACTATGAAAAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTCAAAAGTAAACAATACACAGATGCTAAGGACTTCGCCGGAGAATGCGAATCGGTCGTTGTGATTGCCAAAGGCCAAAGTGTTCAAGGGACATGCAAGTATGGAACTCGAGTCGATTACATATTATCGTCGTCGAATTGTTCGTACAAGTTCGTCCCCGGGTCCTATTTAGTACTCTCCTCAAAAGGGACTTCAGATCATCACATAGTGAGAGCTGATGTGATGAAGGTAAATAGCAATAATGAAGGAAATAATGTGACAAGAAAAACTAAACAAGAAAGAAAACAGAAAGTTATAAGAATAACACATGAGACTCCCTCTAAAGGTATATGGAAAACACACCATGGAGAGATATATTAA 1464 0.4378 MLKLLNTKLRRFFLLRWWPLRRRSSRCKVVITKKHKNDNPKPQNDPSSNLSTISDQNAQMGTQKHEKPIRIATFNAALFSMAPAVPPQRTEKGQNFDDQNGVASRQRRPFDQNSRLKSTNEKPRSILKRSHSHSPLHHHILCSENRALCISNKHQQQPQHHFSKSKLRVSINLPDNEISMLRNRQPSFSEHEKVVIAARNGWQRKTVVEVLKEVGADILGLQEVKAEEENGMKPLSDLAKALGMDHFVFAESWAPQYGNAVLSKWPIKRWTSINLFDHSDFRNVLKATIDVPQVGELNFYCTHLDHLDENWRMKQINAIIQSNDEPHILAGGLNSLDESDYSQERWTDIVKYYEKMGKPTPKVEVMKYLKSKQYTDAKDFAGECESVVVIAKGQSVQGTCKYGTRVDYILSSSNCSYKFVPGSYLVLSSKGTSDHHIVRADVMKVNSNNEGNNVTRKTKQERKQKVIRITHETPSKGIWKTHHGEIY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02417 487 MobiDBLite consensus disorder prediction 92 109 - -
Adu02g02417 487 MobiDBLite consensus disorder prediction 42 63 - -
Adu02g02417 487 ProSitePatterns AP endonucleases family 1 signature 1. 216 225 IPR020847 GO:0003677|GO:0004519|GO:0006281
Adu02g02417 487 Gene3D Endonuclease/exonuclease/phosphatase 181 444 IPR036691 -
Adu02g02417 487 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 1 194 - -
Adu02g02417 487 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 204 481 - -
Adu02g02417 487 MobiDBLite consensus disorder prediction 86 136 - -
Adu02g02417 487 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 1 194 - -
Adu02g02417 487 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 204 481 - -
Adu02g02417 487 Pfam Endonuclease/Exonuclease/phosphatase family 204 435 IPR005135 GO:0003824
Adu02g02417 487 MobiDBLite consensus disorder prediction 110 128 - -
Adu02g02417 487 SUPERFAMILY DNase I-like 200 442 IPR036691 -
Adu02g02417 487 MobiDBLite consensus disorder prediction 31 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02417 Adu-Chr2 89718459 89722735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02417 - - gsj:114390420 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02417 02 89718459 89722735 Adu02g02417 02 89718459 89722735 ECH
Adu06g01038 06 12914758 12918610 Adu02g02417 02 89718459 89722735 PCT