Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu02g02330 | ATGCCTAAAAAGACTTGCCCCTTGTTGCTCCGCGTCTTCACCAAGGAGGGGAGTCATCACACGATGGAGGACTTTGCTGTGAGAGGNNNNNNNNNNNNNNNNNNNNNNNAGCCATCGGAGGAGGTTCAGATTTACACCTGGAAGGACGCTACTCTTCGTGAATTAACCGAGCTCGTCAAAGAAGTGGTTAAACCTGCAAGAAGAAGACATGCAAAGCTCTCATTTGCTTTTGTGTTTCCTGATAAAAATGGTCGATTCAAAGTTCAAGAGGTTGGGAAGACACTGGCATATGGAAATGGAAGATTTGATGACGGCAAGGCTTTAGCCGAACTTGGTTTTGAGATTGGTGATTACTTGGATGTGGCTATTCTCCACGACTACGACGACGATCACAACGAAGACGACGAAGAAGACGACGAGGAAGAAGAAGCCGTAACAAACAAACAAAATCATTTCAACGACGAAACGCTCATCCATCCTCATTCACTCCTTCCATCTCCCGCGCCGCCACACACTTTAAAATCCACGTCACCACCTCGAAACGAGGACGTTTCCTCCGGAATCGGCACCTTCATCAGACAGCGAAGCTCCGGCCTCTCGGACGCAATCTTAAAGAGGATCTCGACGTTTCGCCAAAACGACGACGTTTCGGACAAGAAGAAGGTGGAAATCATGGAGTTCAACCTCTCCGGTGTCAAGGTGGTAGTAGAGCAGAAACAGGAGGAAGTGAATCAACTGAAAGGAAGAATCACCTTCTTCTCGAGATCGAATTGCAGAGACTGCACCGCCGTGAGGAAATTCTTCAGAGAGAAAGGACTTCCGTACGTTGAGATAAACATCGACGTTTTCAGGGAGCGTGAGAAGGAGTTAATGGAGAGAACCGGAGTCTCAGCGGTGCCGCAGATTTTCTTCAACGAGAAGATGTTCGGCGGTTTGGTGGCGCTTAACTCGCTGCGTAGAAGCGGCGATTTCGATCGGAGGGTGGCGGAGATGCTGGCGGAGAAGTGTCCCGACGTAGCGCCGGCGCCGCCGGTGTACGGTGTCGATCCTATAAATCATGATAGGAAAGACGAACTTTATGATCAGATTAGGTTCGTACGGCAGAAAATTGTGATCAGTGATCGGTGGAGGAGGATGAAGATCGTGAGGGACTGTTTCGTTGGCGAAGAGCTCGTTAATGCTTTGGTTGAATACCTTGGTTGCGCGCGTAGCGAGGCTGTAGTGCTCGGAAAACAGTTAGCCAGGAAGCACTTCATCCACCATGTTTTCGGGGAACATGATTTTGAGGAGGGAAATCACGTATACCGTTTCCTTGAGCATGAACCTTTTATCGAAAGTTGCTACAATTTCCGTGATGCCACAAATTATAATGAACCAAAGTCTGCAGCTGTTGTTGGCGACAGGCTTACCAAGATTATGTATGCCATTCTTGAGTCCTATGCTTCTGATGACAGACAATATATTGATTATGATGCCGTTAGACAAAGTGAAGAATTTCGTAGGTATGTAAATATGACAGAGGATCTCCATCGGGTCAACCTATTGGAACTATCAGAAAACGAGAAACTTGCCTTCTTCTTAAATTTGTATAATGCCATGGTCATCCATGCTATTGTTAGAATAGGTTATCCAGAAGGTGTAATGGAAAGAATGTCATTCAATACCACTTTTCAGTATTTAATTGGAGGCAGCCCTTTTTCTATATCTGATATAAAAAATGGTGTCCTCAGATGCAATCAGAGGTCAGCATATTCCTTAGGCAAACCCTTTGGCACAGGAGACAAGCGATTGGAGGTTGTTCTTGTCAAGTTTAATCCGTTAATTCACTTTGGACTTTGTATGGGTTCAAAGTTCAGTCCAAAGATTAGATTCTTCTCAGCTCAAAGAGTAGAAGATGAATTAAGAGGTGCTACAAGAGACTTCTTTGAGAATAATAATGGAATTGAAGTGGACCTGGAGAAGAGAACAGTTCATCTCACTCCGCTTTTAAAGTGGTTCGGTGGTGATTTTGGTACAGAGAAAGATATACTAAATTGGGTACTTAATTACTTGAGTCCCAGTAAATCAGGCCTTTTGTCTCATCTCTTATGTGATGCTGGCCCTGTTAATGTTTCCTACAAGAATTTTGATTGGTCAATGAAAACTTGA | 2148 | 0.4441 | MPKKTCPLLLRVFTKEGSHHTMEDFAVRXXXXXXXXXPSEEVQIYTWKDATLRELTELVKEVVKPARRRHAKLSFAFVFPDKNGRFKVQEVGKTLAYGNGRFDDGKALAELGFEIGDYLDVAILHDYDDDHNEDDEEDDEEEEAVTNKQNHFNDETLIHPHSLLPSPAPPHTLKSTSPPRNEDVSSGIGTFIRQRSSGLSDAILKRISTFRQNDDVSDKKKVEIMEFNLSGVKVVVEQKQEEVNQLKGRITFFSRSNCRDCTAVRKFFREKGLPYVEINIDVFREREKELMERTGVSAVPQIFFNEKMFGGLVALNSLRRSGDFDRRVAEMLAEKCPDVAPAPPVYGVDPINHDRKDELYDQIRFVRQKIVISDRWRRMKIVRDCFVGEELVNALVEYLGCARSEAVVLGKQLARKHFIHHVFGEHDFEEGNHVYRFLEHEPFIESCYNFRDATNYNEPKSAAVVGDRLTKIMYAILESYASDDRQYIDYDAVRQSEEFRRYVNMTEDLHRVNLLELSENEKLAFFLNLYNAMVIHAIVRIGYPEGVMERMSFNTTFQYLIGGSPFSISDIKNGVLRCNQRSAYSLGKPFGTGDKRLEVVLVKFNPLIHFGLCMGSKFSPKIRFFSAQRVEDELRGATRDFFENNNGIEVDLEKRTVHLTPLLKWFGGDFGTEKDILNWVLNYLSPSKSGLLSHLLCDAGPVNVSYKNFDWSMKT | 715 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu02g02330 | 715 | MobiDBLite | consensus disorder prediction | 129 | 143 | - | - | |
| Adu02g02330 | 715 | ProSiteProfiles | Glutaredoxin domain profile. | 238 | 335 | - | - | |
| Adu02g02330 | 715 | CDD | GRX_DEP | 248 | 319 | - | - | |
| Adu02g02330 | 715 | PANTHER | ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE | 131 | 713 | - | - | |
| Adu02g02330 | 715 | Pfam | Sin3 associated polypeptide p18 (SAP18) | 3 | 123 | IPR010516 | - | |
| Adu02g02330 | 715 | CDD | DEP | 367 | 436 | - | - | |
| Adu02g02330 | 715 | ProSiteProfiles | DEP domain profile. | 366 | 439 | IPR000591 | GO:0035556 | |
| Adu02g02330 | 715 | Pfam | Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) | 370 | 437 | IPR000591 | GO:0035556 | |
| Adu02g02330 | 715 | Pfam | Protein of unknown function, DUF547 | 516 | 641 | IPR006869 | - | |
| Adu02g02330 | 715 | Gene3D | - | 355 | 486 | IPR036388 | - | |
| Adu02g02330 | 715 | MobiDBLite | consensus disorder prediction | 175 | 189 | - | - | |
| Adu02g02330 | 715 | PANTHER | F26K24.21 PROTEIN | 131 | 713 | - | - | |
| Adu02g02330 | 715 | MobiDBLite | consensus disorder prediction | 126 | 189 | - | - | |
| Adu02g02330 | 715 | SUPERFAMILY | Thioredoxin-like | 248 | 329 | IPR036249 | - | |
| Adu02g02330 | 715 | SMART | DEP_3 | 365 | 439 | IPR000591 | GO:0035556 | |
| Adu02g02330 | 715 | SUPERFAMILY | "Winged helix" DNA-binding domain | 356 | 459 | IPR036390 | - | |
| Adu02g02330 | 715 | Gene3D | Glutaredoxin | 244 | 332 | - | - | |
| Adu02g02330 | 715 | Pfam | Glutaredoxin | 250 | 307 | IPR002109 | - | |
| Adu02g02330 | 715 | Gene3D | ASAP complex, SAP18 subunit | 2 | 127 | IPR042534 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu02g02330 | Adu-Chr2 | 88609010 | 88618753 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu02g02330 | - | - | adu:107475749 | 1151.35 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Adu02g02330 | 02 | 88609010 | 88618753 | Adu02g02330 | 02 | 88609010 | 88618753 | ECH |