Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02273 ATGTTGCAACCTTTCACACCCTTCTTTTCCTTTCTTCATAGAAAATCCAAATCACTCCTCAACCTCCCAAAACCAGCACCGAGTAGTAGTTGCTGTTCATGCTGGTGCTGGAGAAGACAGCGACCCAGAAGAAAATTCTCACCAAGTTTTGATTTTGATGAATTCTCAGCGTCTTTCATAGACATGAATCTGTCAAGGCAGTTCCAACAAGTGTTCAAGCTCATTGATTCCAATGGTGATGGAAAAATCTCAACCACTGAGCTCAGTGAAACTCTTCTATGTCTTGGATACAACAAGTGCATGGCTAAAAAAGAAGCTGAGAGAATGGTGAGAGCTTTGGACTTTAATGGAGATGGGTTTGTTGACTTTGATGAATTCATGGTTGTGATGAGAGAAGGAATAGCAACAACAGAAGAAGAAGAAGAAGGTGGCAAGAATAATAACAATAATAATATTGATCAAGATGAGTATCTTATGGATGCTTTTCATGTGTTTGATTCTGATAAGAATGGATTAATCTCTGCTAAGGAATTGAGGAGAGTTTTGGTTAATCTTGGGTGTGATCGTTGCAGCATCAGAGAGTGTAAGCGTATGATCAAAAGTGTTGACAAGAATGGTGATGGGTTTGTTGATTTTGATGAATTTAGATCCATGATGAAAAAGGGACTTTCCAAATCCAAACAAAATTAG 690 0.3841 MLQPFTPFFSFLHRKSKSLLNLPKPAPSSSCCSCWCWRRQRPRRKFSPSFDFDEFSASFIDMNLSRQFQQVFKLIDSNGDGKISTTELSETLLCLGYNKCMAKKEAERMVRALDFNGDGFVDFDEFMVVMREGIATTEEEEEGGKNNNNNNIDQDEYLMDAFHVFDSDKNGLISAKELRRVLVNLGCDRCSIRECKRMIKSVDKNGDGFVDFDEFRSMMKKGLSKSKQN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02273 229 CDD EFh 67 131 IPR002048 GO:0005509
Adu02g02273 229 ProSiteProfiles EF-hand calcium-binding domain profile. 101 136 IPR002048 GO:0005509
Adu02g02273 229 ProSitePatterns S-100/ICaBP type calcium binding protein signature. 109 130 IPR001751 -
Adu02g02273 229 ProSiteProfiles EF-hand calcium-binding domain profile. 190 225 IPR002048 GO:0005509
Adu02g02273 229 PANTHER CALCIUM-BINDING PROTEIN CML25-RELATED 56 225 - -
Adu02g02273 229 CDD EFh 157 220 IPR002048 GO:0005509
Adu02g02273 229 SUPERFAMILY EF-hand 66 221 IPR011992 -
Adu02g02273 229 ProSitePatterns EF-hand calcium-binding domain. 114 126 IPR018247 -
Adu02g02273 229 Gene3D - 147 229 - -
Adu02g02273 229 Gene3D - 44 146 - -
Adu02g02273 229 ProSitePatterns EF-hand calcium-binding domain. 203 215 IPR018247 -
Adu02g02273 229 PANTHER CALCIUM BINDING PROTEIN 56 225 - -
Adu02g02273 229 ProSiteProfiles EF-hand calcium-binding domain profile. 153 188 IPR002048 GO:0005509
Adu02g02273 229 ProSiteProfiles EF-hand calcium-binding domain profile. 63 98 IPR002048 GO:0005509
Adu02g02273 229 SMART efh_1 67 95 IPR002048 GO:0005509
Adu02g02273 229 SMART efh_1 105 133 IPR002048 GO:0005509
Adu02g02273 229 SMART efh_1 157 185 IPR002048 GO:0005509
Adu02g02273 229 SMART efh_1 194 222 IPR002048 GO:0005509
Adu02g02273 229 ProSitePatterns EF-hand calcium-binding domain. 76 88 IPR018247 -
Adu02g02273 229 ProSitePatterns EF-hand calcium-binding domain. 166 178 IPR018247 -
Adu02g02273 229 Pfam EF-hand domain pair 67 131 IPR002048 GO:0005509
Adu02g02273 229 Pfam EF-hand domain pair 156 220 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02273 Adu-Chr2 87624401 87625239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02273 158 226 EF-hand Containing Proteins AT1G24620 33.333 7.17e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02273 - - aip:107628548 411.764