Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02221 ATGGCCCAAGTGACCAGAATCCACAATGGTCCTCAAAACGCACAGATTCTTCTTCGCCATACTCACAATTCCCACATACCCAAATCAGCAAATTCAGTTTCATTGAAGTCACAACTTTGGGGCACCTCAAAATCTGTGAGCTTGAATCACAAAAATGGCGACTTTTTGGGAAATTTTGAGGTGGGTAGGTGCAATAATAATGTGGTTAGGGTTTCTGCATCTGTCGCCGCTACAGAGAAGCCTTCGACGGCGCCGGAGATCGTTCTGGAACCTATCAAAGAAATCTCCGGAACCATCACATTGCCTGGCTCGAAGTCTCTGTCCAATCGAATTTTGCTTCTTGCTGCTCTCTCTGAGGGAACAACTGTTGTTGACAACTTGTTGAATAGCGAGGATGTTCATTGCATGCTCGGTGCATTAAGGACCCTTGGACTACGAGTGGAAGATGACAAAAATGCCAAACAAGCAGTCGTGGAAGGCTGTGGGGGATTGTTTCCCACTGGTCGAGAGTCTAAAGAGGAAGTTACTTTATTCCTTGGAAATGCTGGTACTGCAATGCGTCCTTTGACAGCAGCTGTGACTGCTGCAGGTGGAAACACAAGCTATGTACTTGATGGGGTGCCCCGAATGAGAGAGAGGCCTATTGGAGATTTGGTGGCTGGTCTCAAGCAGCTTGGTGCAGATGTTGATTGTTCCCTTGGCACAAACTGTCCACCTGTTCGTGTAGTTGGGAAGGGAGGACTTCCTGGGGGAAAAGTGAAGTTGTCTGGATCAATTAGCAGTCAATACTTGACTGCATTGCTCATGGCAGCTCCTTTGGCCCTTGGTGATGTTGAAATTGAGATTATCGATAAACTGATTTCTGTTCCCTACGTTGATATGACTTTGAAACTGATGGAGCGCTTTGGAGTCCATGTGGAGCACAGTGGTAACTGGGATAGGTTCTTGGTCCACGGAGGTCAAAAGTACAAGTCTCCTGGGAATGCTTTTGTTGAAGGCGATGCTTCTAGTGCCAGCTACTTCCTCGCAGGTGCAGCTGTTACCGGTGGGACTATCACAGTTGTAGGCTGCGGCACAAGTAGTTTACAGGGAGATGTAAAATTTGCTGAAGTTCTCGAAAAGATGGGAGCTAAAGTTACATGGACAGAGAACAGTGTCACCGTTACTGGCCCACCACGAGATCCTTCAGGCCGAAAAGTCTTGCAAGGCGTTGATGTCAATATGAACAAGATGCCAGATGTTGCCATGACACTTGCTGTTGTTGCACTATTTGCTAATGGCCCCACTGCCATAAGAGATGTGGCTAGTTGGAGAGTTAAGGAGACAGAGAGAATGATAGCAATTTGCACAGAACTTAGGAAGCTAGGAGCAACAGTTGAAGAAGGTCCTGATTACTGTGTGATAACGCCACCCGAGAAACTGAACATCACGGCGATCGACACGTACGATGACCACAGAATGGCTATGGCATTTTCTCTTGCTGCTTGTGGCGATGTTCCGGTAACCATCAATGATCCTGGTTGCACCCGGAAAACATTCCCTGATTACTTTGAAGTTCTTGCAAAGTACACCAAGCAATAA 1581 0.47 MAQVTRIHNGPQNAQILLRHTHNSHIPKSANSVSLKSQLWGTSKSVSLNHKNGDFLGNFEVGRCNNNVVRVSASVAATEKPSTAPEIVLEPIKEISGTITLPGSKSLSNRILLLAALSEGTTVVDNLLNSEDVHCMLGALRTLGLRVEDDKNAKQAVVEGCGGLFPTGRESKEEVTLFLGNAGTAMRPLTAAVTAAGGNTSYVLDGVPRMRERPIGDLVAGLKQLGADVDCSLGTNCPPVRVVGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVDMTLKLMERFGVHVEHSGNWDRFLVHGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVVGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPSGRKVLQGVDVNMNKMPDVAMTLAVVALFANGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNITAIDTYDDHRMAMAFSLAACGDVPVTINDPGCTRKTFPDYFEVLAKYTKQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02221 526 Hamap 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 93 526 IPR006264 GO:0003866|GO:0009073
Adu02g02221 526 SUPERFAMILY EPT/RTPC-like 87 522 IPR013792 GO:0003824
Adu02g02221 526 CDD EPSP_synthase 95 522 IPR006264 GO:0003866|GO:0009073
Adu02g02221 526 Gene3D Enolpyruvate transferase domain 103 315 IPR036968 GO:0016765
Adu02g02221 526 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 90 520 IPR001986 GO:0016765
Adu02g02221 526 ProSitePatterns EPSP synthase signature 2. 438 456 IPR023193 -
Adu02g02221 526 Gene3D Enolpyruvate transferase domain 321 523 IPR036968 GO:0016765
Adu02g02221 526 ProSitePatterns EPSP synthase signature 1. 177 191 IPR023193 -
Adu02g02221 526 PANTHER AROM/DEHYDROQUINATE SYNTHASE 18 525 - -
Adu02g02221 526 PANTHER 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE, CHLOROPLASTIC 18 525 - -
Adu02g02221 526 TIGRFAM aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 97 525 IPR006264 GO:0003866|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02221 Adu-Chr2 86720338 86724741 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02221 K00800 - gmx:100789268 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02221 02 86720338 86724741 Adu02g02221 02 86720338 86724741 ECH