Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02216 ATGGCTTCTCCATCGGCATTTTCGCGCCTTAACCTTCTCCTCCCGAAACCTTCTCTTTTTGCCGCCAATTTCCGCAGAACCCAATTCCATTTCTTCCCCACTCTTTCTTCCCGCACCATCTCCTCCTCCTCCTCCTCCTCCCTAACATGCTCTTCTTATTCTAATTCTTCTATGAAAGAGCTCCAAAACCCAACCCCAAAACGCGACAACCACTTTGTCGTTTTGGGCATTGAAACCAGCTGCGACGACACTGCCGCCGCCGTTGTGAGAAGCAACGGTGAAATTCTGAGTCAAGTCGTGTCTTCTCAGGCAGATCTGCTAACGAAATATGGAGGTGTCGCTCCAAAAATGGCAGAAGAAGCTCACTCGCAGGTTATTGACCAGGTTGTGCAAGAAGCTCTTGATAATGCTTACATGACTGAGAAGGATCTTACTGCAGTTGCTGTTACTATTGGTCCTGGTTTAAGTCTTTGCCTTCGTGTTGGAGTGCAGAAGGCTCGACAAATTGCTGGGTCCTTTAAGTTACCAATTATTGGCATACATCACATGGAAGCACATGCTCTAGTAGCCAGGTTAACTGAGAAAGATTTACAGTTTCCATTCATAGCCCTACTCATATCAGGGGGACATAATCTACTCATTCTAGCTCGTGATCTTGGGCAATATGTACAACTTGGAACAACAATAGATGATGCAATTGGTGAAGCATATGACAAGACAGCCAAATGGCTTGGACTTGATTTGAGGAGAAGTGGTGGTCCTGCTATAGAGGAGCTTGCTAAGGAGGGGAATGCCAAATCAGTAAGCTTTTCAGTTCCAATGAAGCAGCACAAAGATTGCAACTTTTCCTATGCTGGTCTAAAAACCCAAGTAAGGTTGGCAATTGAATCCAAAAAGATTGATGCCAACATCCCTATTTCTTCTGCAAGTAAAGAAGATCGATTGGCCCGGGCTGATATTGCTGCTGCTTTTCAGCGAATTGCAGTGTTACATCTTGAGGAAAGGTGTGAACGTGCAATCCAGTGGGCATTGAAGATGGAGCCTTCTATAAGACACCTGGTAATTATCTCTGGTGGTGTTGCATCAAATCATTATGTTCGATCTCGGCTTGATATGGTTGTGAAGAAGAATGGCTTGCAACTTGTATGCCCTCCTCCCCGGCTTTGTACTGACAATGGTGTAATGGTAGCTTGGACTGGCATTGAGCACTTCCGCATGGGAAGATATGACCCTCCTCCACCTGCAGAAGAACCAGAAAACTTTGTGTATGATTTGCGGCCGAGGTGGCCACTAGGGGAAGAATATGCCGAAGGAAGAAGTGACGCACGCTCAATAAGAAGGGCTCGTCTTCATCCATCTCTTACGTCTATAATTCAAGCATCATCACAGCAGTGA 1395 0.4581 MASPSAFSRLNLLLPKPSLFAANFRRTQFHFFPTLSSRTISSSSSSSLTCSSYSNSSMKELQNPTPKRDNHFVVLGIETSCDDTAAAVVRSNGEILSQVVSSQADLLTKYGGVAPKMAEEAHSQVIDQVVQEALDNAYMTEKDLTAVAVTIGPGLSLCLRVGVQKARQIAGSFKLPIIGIHHMEAHALVARLTEKDLQFPFIALLISGGHNLLILARDLGQYVQLGTTIDDAIGEAYDKTAKWLGLDLRRSGGPAIEELAKEGNAKSVSFSVPMKQHKDCNFSYAGLKTQVRLAIESKKIDANIPISSASKEDRLARADIAAAFQRIAVLHLEERCERAIQWALKMEPSIRHLVIISGGVASNHYVRSRLDMVVKKNGLQLVCPPPRLCTDNGVMVAWTGIEHFRMGRYDPPPPAEEPENFVYDLRPRWPLGEEYAEGRSDARSIRRARLHPSLTSIIQASSQQ 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02216 464 Gene3D - 200 384 - -
Adu02g02216 464 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 168 187 IPR017861 -
Adu02g02216 464 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 202 214 IPR017861 -
Adu02g02216 464 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 354 363 IPR017861 -
Adu02g02216 464 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 225 246 IPR017861 -
Adu02g02216 464 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 75 88 IPR017861 -
Adu02g02216 464 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 147 167 IPR017861 -
Adu02g02216 464 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE 69 443 IPR000905 -
Adu02g02216 464 TIGRFAM gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 75 397 IPR017861 -
Adu02g02216 464 SUPERFAMILY Actin-like ATPase domain 74 398 IPR043129 -
Adu02g02216 464 Hamap tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 72 431 IPR022450 GO:0002949
Adu02g02216 464 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED 69 443 IPR022450 GO:0002949
Adu02g02216 464 TIGRFAM T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 74 404 IPR022450 GO:0002949
Adu02g02216 464 Gene3D - 74 406 - -
Adu02g02216 464 Pfam tRNA N6-adenosine threonylcarbamoyltransferase 94 398 IPR000905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02216 Adu-Chr2 86609174 86614061 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02216 K01409 - gmx:100784367 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02216 02 86609174 86614061 Adu02g02216 02 86609174 86614061 ECH