Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02208 ATGGCTGGTGAATCTGATGTCTCTGAAAATGCACTTTCTTGTGCTAACTGTGGAAAACCCGCAAATCTTCAGTGTCCAAAGTGCATTGAATTGAAGCTTCCTCGTGAAGGTTCTGCTTTCTGCTCCCAGGATTGTTTCAAGTCTTCGTGGAGCTCGCACAAGTCGGTGCATGTGAAGGCGAAGCTATCCTCACCTGGCATGGGCACTCCAGGTGAGCAGGACTCGAGCTCACCTGGTGAAAGTTGGTTATACTGCTTGAAGAGAGGGCAGTCACGAACTCCAAAGATGCCTCACTTTGATTGGACTGGGACGTTGCGGCCATATCCCATATCTGTTAAACGCATTGTTCCAGCTAATATTGATAAACCAGACTGGGCAGATGATGGAATTCCCAAAATTGAGCCTAATAGTGACTTCCAGCATACTGTTGAGATTAAATCTCCAGATCTAATTGCGAAAATGAGAGAAACATGTCGGATTGCAAGGGAGGTTTTGGATGCGGCTGCTCGTATTGTTCGGCCTGGTGTGACAACTGATGAGATTGACAAAGTTGTTCACGACACAACTATTGCTGCAGGAGGATATCCATCACCTCTCAATTATCATTTCTTCCCTAAATCTTGCTGCACGTCAGTTAATGAAGTAATCTGTCATGGAATTCCTGATGCAAGGAAGCTTGAAGATGGAGACATTGTAAATATTGATGTCACTGTGTACTATAAAGGTGTACATGGTGATCTCAACGAAACGTACTTCGTGGGAAATGTTGATGAAGACTCTCAGAAGCTGGTCAAATGCACATATGAGTGCCTTGAAAAGGCAATAGCTATTGGTATATTACCAGTGTATTTCTACTCAAGAAATAAAGCAGTTGGTATTATGAAGGCTGGACAAACCTTCACAATTGAACCAATGATCAACGCAGGCATGTTTCTAAAAGGTATCTGGCGTGATCGAATGTGGCCAGATGGATGGACTGCTGTCACTGCAGATGGTAAACGAAGTGCTCAATTTGAGCACACTCTTTTGGTGACAGACACTGGTGTTGAGGTCCTAACAGGGAGGTTGCAGACATCACCCAATGTTTTTCCATGGTTGAAATCATGA 1107 0.4408 MAGESDVSENALSCANCGKPANLQCPKCIELKLPREGSAFCSQDCFKSSWSSHKSVHVKAKLSSPGMGTPGEQDSSSPGESWLYCLKRGQSRTPKMPHFDWTGTLRPYPISVKRIVPANIDKPDWADDGIPKIEPNSDFQHTVEIKSPDLIAKMRETCRIAREVLDAAARIVRPGVTTDEIDKVVHDTTIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNVDEDSQKLVKCTYECLEKAIAIGILPVYFYSRNKAVGIMKAGQTFTIEPMINAGMFLKGIWRDRMWPDGWTAVTADGKRSAQFEHTLLVTDTGVEVLTGRLQTSPNVFPWLKS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02208 368 Pfam Metallopeptidase family M24 153 276 IPR000994 -
Adu02g02208 368 Pfam zf-MYND-like zinc finger, mRNA-binding 15 58 IPR031615 -
Adu02g02208 368 Gene3D - 3 61 - -
Adu02g02208 368 SUPERFAMILY HIT/MYND zinc finger-like 12 55 - -
Adu02g02208 368 SUPERFAMILY Creatinase/aminopeptidase 99 354 IPR036005 -
Adu02g02208 368 CDD MetAP1 151 353 IPR002467 GO:0006508|GO:0070006
Adu02g02208 368 PANTHER METHIONINE AMINOPEPTIDASE 282 361 - -
Adu02g02208 368 PANTHER METHIONINE AMINOPEPTIDASE 12 277 - -
Adu02g02208 368 PANTHER METHIONINE AMINOPEPTIDASE 1 282 361 - -
Adu02g02208 368 PANTHER METHIONINE AMINOPEPTIDASE 1 12 277 - -
Adu02g02208 368 Gene3D Creatinase/methionine aminopeptidase superfamily 280 364 IPR036005 -
Adu02g02208 368 Gene3D Creatinase/methionine aminopeptidase superfamily 99 278 IPR036005 -
Adu02g02208 368 PRINTS Methionine aminopeptidase-1 signature 230 246 IPR001714 -
Adu02g02208 368 PRINTS Methionine aminopeptidase-1 signature 208 221 IPR001714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02208 Adu-Chr2 86554577 86560183 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02208 K01265 - gmx:100813779 618.616