Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02164 ATGTCTCCCTCCGACGTAGCCCCTTCGACAGCGACGACCGTTACTCCAACGACAAGTCCCAGTAGCGACGATAGTGGCCTCCATCCTCCTCCGCTCTCTCTTCCCTCCTCCCTCTTCCTCTCCCATTGTCATTTCGCTCCGCCACCACTCACTCTTGAACCAATTCACAAGCCTTTCCTACTCAATCCTCCTTCTTCTAAAAAGCCGTCGTTTCAACAACACCGTGTTTGGAGCACCAGCATCATAAAGGGTGCAATAGCAGAGTTAGAAGGAGACCTAGAGCTTCCACCAAACGCGGTTCGGAGAAAGAGGGACCCAAATTGGAGAGGTGGCTTCAGCCTCGGAATTGATTTGGGCATGGCCCGCACTGGCCTCGCCCTCACTAAAGGCTTCAACATTCGCCCTTTAACCGTTTTGGAACTGCGAGGACAGAAGCTTGAGCTCAAGATAATTAACATAGCTGAACAACAGGAGGCTGATGAGTTCATAATTGGACTTCCGAGATCTTCTGATGGGAAGGAGACGCCGCAATCCAACATTGTTCGTAGTGTGGCAGGAAGACTCGCCGTTCGAGCTGCCGATAGGGGTTGGAGAGTATACCTACAGGATGAACATGGAACAACAACAGAGGCAGTAAATCGGATGATCACTATGGGTCTAAGTAAGTCCTCTCAGCAGAGGAAGCTTGATGCCTATGCTGCCATGATGGTATTGGAAAGATACCTATCCACATCAGGTCAGGGTACCGAACTTGTTTTGCCCAAGAACCTTGAATTACAAGAAAAACTTCGAAGGGGTCCTCCCAAAGATGCCGATTTTTTCTCGGATGAAGATTAA 837 0.497 MSPSDVAPSTATTVTPTTSPSSDDSGLHPPPLSLPSSLFLSHCHFAPPPLTLEPIHKPFLLNPPSSKKPSFQQHRVWSTSIIKGAIAELEGDLELPPNAVRRKRDPNWRGGFSLGIDLGMARTGLALTKGFNIRPLTVLELRGQKLELKIINIAEQQEADEFIIGLPRSSDGKETPQSNIVRSVAGRLAVRAADRGWRVYLQDEHGTTTEAVNRMITMGLSKSSQQRKLDAYAAMMVLERYLSTSGQGTELVLPKNLELQEKLRRGPPKDADFFSDED 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02164 278 Gene3D - 113 250 IPR037027 GO:0006139
Adu02g02164 278 SMART rnase_8s 111 211 IPR006641 GO:0006139
Adu02g02164 278 MobiDBLite consensus disorder prediction 1 30 - -
Adu02g02164 278 Hamap Putative pre-16S rRNA nuclease [yqgF]. 111 246 IPR005227 GO:0006364
Adu02g02164 278 Pfam Holliday junction resolvase 113 243 IPR005227 GO:0006364
Adu02g02164 278 MobiDBLite consensus disorder prediction 1 26 - -
Adu02g02164 278 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 81 277 - -
Adu02g02164 278 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 81 277 IPR005227 GO:0006364
Adu02g02164 278 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 114 242 IPR005227 GO:0006364
Adu02g02164 278 CDD YqgF 114 242 IPR005227 GO:0006364
Adu02g02164 278 SUPERFAMILY Ribonuclease H-like 112 244 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02164 - - lja:Lj3g3v1440180.1 328.561