Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02108 ATGTCCCTAGCGGTGGCTGCGATTTTCGAAGATCAAACCAAGCTGACTTCGCGACGGAAAGTgTCACTGCCTTCTAGAAGCAGTGACCTCGCCGCGTTGGGTACGCGAGGTTTCAGGATACTTATGGTATCCGACCTCTTCCCAGAGGTCGGCCTCAAGGTTGCATGTGTGGTTACTTTGGTGTGCATGGCCTTGGTGGGTGCACCAATGGTCCAGGCCATCACATGTGGTCAAGTGGTTAGTGCACTAACACCATGCATAGGGTACCTACGAATGGGGGGAAATCCTACACCAGCATGTTGTAGTGGGGTTAGGAACCTTAACCAGGCTGCTGCCACTACTGCCGACCGTAAGACTGCCTGTGTCTGTCTAAAAAATGCGGCCGGCAATATTGGTGGCATCAGCCCTACCTATTCTCAGTCACTTCCTGGCAAATGTGGGGTTAACCTCCCTTATAAGTTCAGCACTTCCACCAATTGTAACACCATCAATTAA 495 0.5111 MSLAVAAIFEDQTKLTSRRKVSLPSRSSDLAALGTRGFRILMVSDLFPEVGLKVACVVTLVCMALVGAPMVQAITCGQVVSALTPCIGYLRMGGNPTPACCSGVRNLNQAAATTADRKTACVCLKNAAGNIGGISPTYSQSLPGKCGVNLPYKFSTSTNCNTIN 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02108 164 PRINTS Plant phospholipid transfer protein signature 75 91 IPR000528 GO:0006869|GO:0008289
Adu02g02108 164 PRINTS Plant phospholipid transfer protein signature 151 162 IPR000528 GO:0006869|GO:0008289
Adu02g02108 164 PRINTS Plant phospholipid transfer protein signature 95 109 IPR000528 GO:0006869|GO:0008289
Adu02g02108 164 PRINTS Plant phospholipid transfer protein signature 116 131 IPR000528 GO:0006869|GO:0008289
Adu02g02108 164 PRINTS Plant phospholipid transfer protein signature 133 150 IPR000528 GO:0006869|GO:0008289
Adu02g02108 164 SMART aai_6 76 160 IPR016140 -
Adu02g02108 164 CDD nsLTP1 74 161 - -
Adu02g02108 164 Pfam Protease inhibitor/seed storage/LTP family 76 160 IPR016140 -
Adu02g02108 164 Gene3D - 73 164 IPR036312 -
Adu02g02108 164 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 74 163 IPR036312 -
Adu02g02108 164 ProSitePatterns Plant lipid transfer proteins signature. 142 163 IPR000528 GO:0006869|GO:0008289
Adu02g02108 164 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED 52 161 - -
Adu02g02108 164 PANTHER - 52 161 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02108 Adu-Chr2 84645508 84649628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02108 73 164 Acyl Lipid Metabolism Gene Families AT5G59310 56.522 4.00e-30 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02108 - - qsu:112036584 145.976