Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02060 ATGGGTGCAGGTAGGAAAACACAACCTGTTGGTCCACCATATTCAGAGATCAGTTTTCCATTCTGTCGAAATCTAAGGAAGAATCAACTTGGTGGTGTCATATTTGGTTGCAAGAACAGTACATTGAAAGAATGCTTATCTAAACAACTCTTTGGCTTACCAGCTCTGCATTATTTCTATGTGAAGAACATTGAACCTGGGTTGCCACTGTTTTTGTTCAACTATAGTGATAGGAAGATTCATGGTATTTTTGAGGCAGCTAGCAAAGGACAAATGTATATTGATCACCATGCTTGGTCTGTGGATTGTTCAGAGATAACACAATATCCTGCACAGGTGAAAGTTCGCGTCCGACTTCAGTGCCAGCCATTGTCTGAAGATAGATTTGGACAAATAATCAAAGAAAACTACTTCAGTCGTAACCATTTCTGGTTTGAGCTAGACCATATACAAGCAAACAAGCTGAACTCTCTACTAGTGTTTTCAGCATTTGCACCTGCTACTCCTTCGCCGCAGAGTATGAAGTGGAGGGCAGTACCTCAACCTCTTCCATCACATGAAACTCCTCCAAAGAAAGGTGAATCATTCGAAATGCCTGAATCGGAGGCAGAGCATTTTACTGATTCGAGTGGAACAAACTCCATCGAGATAACTTCTTCCTTAGATGGAGATGATCAATTGGATACTCACATAGCTGTGAATGAGGTAAAAGAGGATGAAAAAGACCTTGTACACATGAAGCTAAAGGAATTGTCTCTTGGCCGCGAAATTCAAGACCTCTCTTCGCCGGACAATCCAAATGCAGCTCCCAATAACAACCCAAATGTCAATGAGGATGAGAATAATAATCAGTTCTCTGTCAAAAAGAGTGATCAAGAGGTTCCACCTGAAGTAGAGAAGAATGAAGAGAGTTTAAGCCCTCCGCTTGAGTATCAACAGTCGATAGAGCAGGTGATTGAGGCGACATTGGAAATTCAGCATTTAAAAGATCGTTGTATAATGCTAGAATCTGCATGTAATCTTCCTCTAGCACCTGTTGAGAAGATAGCCATTGAATCATCTGAGGAGATGCACTTAGACAATAGAGAGTCATTGTTTCTAATAGGAGGTTTCGATGGAGAATCATGGTTATCAGCTATGGATTTGTATTGGCCTTCCCAGAATGTGGTCAAGTCTCTTAAGCCTATGAGCATAGTTCGCTCATATTCTTCGGTAGTAAATCCATTCCACAACGAGTGGACTTCACGTCCTTCTTTGAATCAGAAGAAAGGATGCTTGGCTGGAGCTGCCTTGAGTGACAAGATATTTTCAGTTGGTGGTGGCGATGGAGATAGCTGTTTTTCAGACGTTGAGATGCTTGATTTGGAAGTTGGACGGTGGATTTCAACACGTTCAATGCTGCATAAGAGATTTGCAGTTGCTGCTGCAGAACTCAATGGTGCATTATATGTTACTGGTGGTTATAATGGAGTTGATTATTTGAAGTCTGCTGAAAGATTTGATCCTAGGGAACATTCATGGACCAAAATACCAGACATGAATACAAGGCGGGGCTGCCACTCCATGGTTGTGTTGAATGGGAAATTGCATGCACTTGGTGGCTTTGATGGAAGCACAATGGTGTCGAGCATTGAAGTGTTTGATCCTCGTCGCGAAGCATGGATAACCGGGGAACAAATGAATCAACCTAGGGGATATTTTGCTGCTGCTGTTGTTAAAGAAACTATACATGTAATTGGGGGAGTCAAGGTTGGAGAGAACATCGTAGAAAGGGTTGAGAATTATAAGGAGGATAAAGGATGGCAAGAAACTTGCACAAAAATGGTTGGAAAAAGGTGTTTCTGTTCGGCTATTGCCCTTTAG 1863 0.4187 MGAGRKTQPVGPPYSEISFPFCRNLRKNQLGGVIFGCKNSTLKECLSKQLFGLPALHYFYVKNIEPGLPLFLFNYSDRKIHGIFEAASKGQMYIDHHAWSVDCSEITQYPAQVKVRVRLQCQPLSEDRFGQIIKENYFSRNHFWFELDHIQANKLNSLLVFSAFAPATPSPQSMKWRAVPQPLPSHETPPKKGESFEMPESEAEHFTDSSGTNSIEITSSLDGDDQLDTHIAVNEVKEDEKDLVHMKLKELSLGREIQDLSSPDNPNAAPNNNPNVNEDENNNQFSVKKSDQEVPPEVEKNEESLSPPLEYQQSIEQVIEATLEIQHLKDRCIMLESACNLPLAPVEKIAIESSEEMHLDNRESLFLIGGFDGESWLSAMDLYWPSQNVVKSLKPMSIVRSYSSVVNPFHNEWTSRPSLNQKKGCLAGAALSDKIFSVGGGDGDSCFSDVEMLDLEVGRWISTRSMLHKRFAVAAAELNGALYVTGGYNGVDYLKSAERFDPREHSWTKIPDMNTRRGCHSMVVLNGKLHALGGFDGSTMVSSIEVFDPRREAWITGEQMNQPRGYFAAAVVKETIHVIGGVKVGENIVERVENYKEDKGWQETCTKMVGKRCFCSAIAL 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02060 620 SMART dcd 28 166 IPR013989 -
Adu02g02060 620 MobiDBLite consensus disorder prediction 190 204 - -
Adu02g02060 620 SMART kelc_smart 434 480 IPR006652 GO:0005515
Adu02g02060 620 SMART kelc_smart 481 527 IPR006652 GO:0005515
Adu02g02060 620 SMART kelc_smart 364 412 IPR006652 GO:0005515
Adu02g02060 620 SMART kelc_smart 528 574 IPR006652 GO:0005515
Adu02g02060 620 Coils Coil 311 331 - -
Adu02g02060 620 Pfam Kelch motif 427 466 IPR006652 GO:0005515
Adu02g02060 620 Pfam Kelch motif 516 560 IPR006652 GO:0005515
Adu02g02060 620 Pfam Kelch motif 471 514 IPR006652 GO:0005515
Adu02g02060 620 PANTHER - 22 620 IPR044832 GO:0034976
Adu02g02060 620 PANTHER INFLUENZA VIRUS NS1A-BINDING PROTEIN 22 620 - -
Adu02g02060 620 MobiDBLite consensus disorder prediction 205 222 - -
Adu02g02060 620 MobiDBLite consensus disorder prediction 258 290 - -
Adu02g02060 620 MobiDBLite consensus disorder prediction 256 309 - -
Adu02g02060 620 Pfam Development and cell death domain 31 158 IPR013989 -
Adu02g02060 620 ProSiteProfiles DCD domain profile. 28 161 IPR013989 -
Adu02g02060 620 MobiDBLite consensus disorder prediction 169 222 - -
Adu02g02060 620 Gene3D - 354 619 IPR015915 GO:0005515
Adu02g02060 620 SUPERFAMILY Kelch motif 364 618 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02060 Adu-Chr2 83632599 83636015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02060 482 601 EF-hand Containing Proteins AT4G39560 27.820 1.17e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02060 - - pvu:PHAVU_008G092000g 686.411