Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01964 ATGGCAACATGGGTCTTATCAGAATGTGGGTTAAGGCCTCTTCCCCCAATGTTCCCTAGACCAAGAACTGGATCCATTTCATGCACCAAATCTTCTTCTATAAACTCCACATTCTTATCCTCAGATCTGAAGAGCTTCCAACAACAAACAAGGTTCCAATGTTGTAGTTTTAAGGAGAGAAGAAGAAGCTGGGAGATTAAGGTTAGTGTACCTTTAAGGGTTGGCACCATTGAGGAGGAAGAAGAAGAAGAAGGAATCATCAATGGTGTTGTTGAAAAAAGAGAAGTTTGTGAATTTGACCCTGGTGCACCACCACCATTCAAATTGAGTGACATAAGAGCAGCAATACCTAAGCACTGTTGGGTGAAGGATCCATGGAGGTCAATGAGTTATGTTGTGAGAGATGTTGTTGTTGTTCTTGGTTTGGCGGCTGCTGCTGCACACCTCAACAATTGGATTGTTTGGCCTCTCTATTGGGCTGCTCAAGGAACCATGTTTTGGGCACTTTTTGTTCTTGGTCATGATTGTGGTCATGGAAGCTTCTCAAACAATCCCAAACTGAACAGTGTTGTTGGACATTTGCTGCATTCTTCAATTCTAGTACCATATCATGGATGGAGAATTAGTCATAGAACTCATCATCAAAACCATGGCCATGTTGAAAATGATGAATCTTGGCACCCGCTGCCTGAAAAAATCTTCAAGAGCTTGGACAATGTAACACGTACCTTAAGATTCACAATACCTTTTCCAATGCTTGCATATCCTATATACCTTTGGAGCAGAAGTCCTGGGAAGACAGGTTCTCACTTTCATCCAGATAGTGACTTGTTTGTCTCAAATGAGAGAAAAGATGTTATCACTTCAACAATTTGTTGGGCAGCCATGGCTTCTTTGCTAGTTGGGTTAGGGTTTGTGATGGGTCCAATCCAATTGCTTAAGCTTTATGGCATTCCTTACGTGCTTTTTGTTATGTGGTTGGACTTTGTTACTTATTTGCATCACCATGGCCATGAAGACAAATTACCATGGTACCGTGGAGAGGAATGGAGCTACCTTAGGGGCGGGCTTACAACTCTTGATCGTGACTATGGTTGGATTAATAATATTCACCATGATATTGGAACTCATGTCATACATCATCTCTTTCCTCAAATTCCCCATTATCACTTAATAGAAGCAACTGAAGCAGCAAAGCCAGTTCTTGGAAAGTATTACCGAGAGCCAAAGAAATCTCTACCTCTTCCATTTCACCTTATTGGAGATTTGATGAGAAGCATGAAGAAAGATCATTATGTTAGTGACACTGGTGATGTTGTTTATTACCAAACAGACCCTACACTTGGTGGCTCTTCTACATCAATTTAA 1368 0.4115 MATWVLSECGLRPLPPMFPRPRTGSISCTKSSSINSTFLSSDLKSFQQQTRFQCCSFKERRRSWEIKVSVPLRVGTIEEEEEEEGIINGVVEKREVCEFDPGAPPPFKLSDIRAAIPKHCWVKDPWRSMSYVVRDVVVVLGLAAAAAHLNNWIVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFKSLDNVTRTLRFTIPFPMLAYPIYLWSRSPGKTGSHFHPDSDLFVSNERKDVITSTICWAAMASLLVGLGFVMGPIQLLKLYGIPYVLFVMWLDFVTYLHHHGHEDKLPWYRGEEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKKSLPLPFHLIGDLMRSMKKDHYVSDTGDVVYYQTDPTLGGSSTSI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01964 455 PANTHER TEMPERATURE-SENSITIVE SN-2 ACYL-LIPID OMEGA-3 DESATURASE (FERREDOXIN), CHLOROPLASTIC 48 453 - -
Adu02g01964 455 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 48 453 - -
Adu02g01964 455 Pfam Fatty acid desaturase 153 406 IPR005804 GO:0006629
Adu02g01964 455 Pfam Domain of unknown function (DUF3474) 1 144 IPR021863 GO:0016717
Adu02g01964 455 CDD Delta12-FADS-like 123 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01964 Adu-Chr2 81872402 81876795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01964 1 451 Lipid Metabolism Gene Families AT3G11170 70.732 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01964 K10257 - gmx:100217335 761.14