Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu02g01957 | ATGGTCGGAAAAGCCATGGCCCCGACCTCGCGCGAGAAGCTCGCCAACCTCTTCAACTCTGCCAAGTTCGCCGGTGATGTAACTTCCAAGCTCGATACTCTCCGCCGGTTGCGGCGCCAACTTCCGCCGGAGGACCCCGTAATCCTCGCCGAGTTTCTCCCGTCGCTTTTCGAATTCCTCTCTGATCAATTCAGCCCCGTTCGCAAGTTTGTCACCGAGATGGTTGGTGAAATTGGATTGAAGAACACGGAGTTCCTGCCAGACATTGTGCCTGTGCTGATTGAAGTGTTGGACGATGACACTCCTGCTGTTGTTCGACAAGTTATATTGCTGGGAATCGATTTGTTTCGTTCCACGCTTGAGAAAATCGCACTTCAGGGTCTATATTCTAGTGATTTAGACAGTGCACTTGAATCTGCATGGGTATGGATGGTGAAATTCAAAGATAAAGTATACTCAATTGCTTTTCAACATGGAAGTGGTGGTGCAAGGCTGCTGGCACTGAAGTTTGTTGAAGCAGTTATTCGTCTTTACACACCTGATCCCAATGGTTCCTTGGAGCCCACTCCTCATCAAGGAAGGCCCATGGGGTTTAATATATCATGGCTGAGGCGTGGTCATCCTGTACTTAATGTTCGTGATTTGTCAACTGAAGCTAGTCACAGTTTGGGTCTGCTGCTTGATCAACTCAGGTCTCCAACTGTGAAGTCTCTGAGTAACTCAGTGATCATTGTGCTAATTAAAAGCCTTTCAGCTATTGCAATAGACAGGCCTACATTCTATGGCCGCATCTTGCCTGTTTTGCTCAATTTGGAACCCCCGAGCACTGTTGTTAATGGGGTGAGTGTAACAGCGGCACATCTTGCTTTGAAGAATGCCTTTCTGACATGCTCAAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGATCGTTTGGCTGGTGCCTTGAAGGAGATGCAGTCTGATGGTAAGGCAGACCAGGTTTTCCACCTGATATCTGATATTAACGGAAGCTTAGAGAAAGAGAAAGATGTTCAACCACTTATCAAGAAAGAGGAACATGCTGTAAATTCATGTGATTCAGTGCACAGTAATTTGGCTAGTAAGCGAGCAGGATCACAAAATGGAGGTGATTTAGCTGAAGATGAAGATGTGCCTATAAAACGTGTCAAAACAACTTCTGATTTAAAGGAACCTAAGAAAGAGTTAGGCAGAGGTACCACTAACTCTCAGGATGACACTCCTTCAATGGGTCCAAAATCATCAAAAGGAGATGTAGATAATGGCCATGTGCAGCAGCTTGTTGCCATGTTTGGTGCTTTGGTTGCACGAGGTGAAGAAGCTGTTGCCTCCTTGGAAATTCTTATATCAAGTATTTCTGCTGACTTGCTTGCTGATGTGGTGATGGCAAATATGCATCACCTACCTTACCCGAATTCCGAAGGAGATGATGAACTGCTGCATGACATCAACATTATTGGTTCTGATGACAAGGCTAAATATCCACCATCTTTTGTGGCTGGCGTCATGTCACTTTCCAGTACTTTCCCACCAATAGCATCACTTCTTGGTGCTCATCAATCCGTCTCCAATGAGAGGTCTCAAGGGGACGAAGAAGTTTCTGCAAGTGGGGTAGATAGTGCTGCTGTGCATTCTGGACTAATTCTTACTTCCGAAAATGTCTCCTCTCCTACTGACTTTCCGTCCTCTGATGCCAGCATACCTGGAGTGGAGAATGGATGTGCAACTGTGCCTTCTAATATTCATGATATTGGAAACATAGAGAGTGGAATCCCTGGCCTGGATTCTTTCGGTCGTAGTGATGCTTATTCCGAAAGTTTGGCTGCTTCCTCGTTGGCCTCGTCTGAGATTCAACATGAAGAAACTAATCAAGAACAAGCAACTAGTTTAGATCAAAGGTCACCACTGAACTTAGTTACATCGGTATCTACAGATAGATCTGAGGAGCTCAGCCCAAAAGCAGCTGTTGCAGATGTCAACAGCTTGGTGTCATCAACAGCTACTTCGGTTGTGTTGCCTTCCCGTGTAGTCCTGCCAAAGATGATTGCACCTGTTGTTGACCATTCAGATGAGCAAAAGGATCAATTGCAAAAGTTGTGTTTCATGCGTATTGTTGATGCATATAAGCAAATAGCTGTAGCTGGAGGATCACAAGTCCGATTTTCAATACTTGCTTATTTAGGAGTAGAGTTTCCCTTGGAATTAGACCCGTGGAAACTATTACAAGATCATATTTTGGTTGATTATACTGGTCATGAGGGACACGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGAGGAGCCTGACTTCTTTTCTTCCACAACTGCAGCTTCTGCATATGAAACATTCCTCCGAACGGTGGCAGAAGCACTTAGAGATTCTTTCCCACCTTCAGATAAATCATTAAGCAAACTGCTCAGTGAATCACCATATTTACCAAAATCAGTTTTGAAAATTCTAGAGAACATGTGTTCTCCTGGAAATGGGGATAACATTGAAAAGGAGTCAAACTCTTTGAATGCCGACAGAGTTACTCAAGGTCTCAGTGCTGTATGGAGTTTGATTCTTCTGAGGCCTCCCATTCGGAATACCTGCTTAAAAATTGCTTTACAGAGTGCAGTGCATCACATGGAAGAAGTGCGTATGAAGGCTATACGTCTGGTGGCAAATAAGCTTTATCCTTTACCATCCATTTCTAAGCAAATAGAAGATTTTGCAAAAGAGATGTTGTGCTCAGTGACGAGTGATGCATCTGAAGCTACTGATGCTGAAGGATCCCTTGCTGATTTACAAAAGGGACCTGATACTGAAAAGCTTGCAAATGAGACATCATCAATGACTAGCAGCAGTAAGGACATCTCACCAGATAATCGTCAACCAGTCACATCTGAAAGTATCTCTCCAGAATCAGTTTTTGAGGCTCAGAGGTTAATGTCATTGTATTTTGCTTTGTGTACGAAGAAACACTCTCTCTTTCGCCAAATATTTTCCATCTATAAGAGCACATCAAAAGCAGTGAAGCAGGCAGTTCAGCGTCAAATTCCTATATTAGTACGTACTATGGGCTCATCTCCAGATCTCCTTGAAATTATTTCAGATCCTCCAATTGGTAGCGAGAGCCTCCTAATGCAGGTGTTACATACACTTACAGATGGTACAGTCCCTTCTAGGGATTTAGTGGTTTCAGTGAAGCAGTTGCATGATTCAAAACTTAAGGATGCGGAGGTTCTTATTCCAATATTACCATTCTTACAAAAAGATGAGGTAATGCCAGCTTTTCCGAGTATTGTGAATCTTCCTTTGGAGAAGTTCCAAGCAGCGCTTAGTCGCATGTTGCAGGGATCATCACAAGCTGGTCCTGTGCTCACACCTGCTGAAGTCTTAATTGCAATACATGGAGTTGACCCAGAAAGAGATGGGATTCCCTTGAAAAAGGTCACAGATGCATGTAATGCTTGCTTTGAGCAACGACAAACTTTTACCCAGGAAGTTCTTGCCAAAGTTTTGAATCAATTAGTTGAGCAGATTCCTCTTCCTTTACTGTTTATGCGTACAGTGTTGCAAGCAATTGGTGCTTTTCCAACGTTGGTGGACTTTATAATGGGAATTCTCTCGCGGCTTGTGAGGAAGCAGATTTGGAAATACCCAAAGTTGTGGGTGGGATTCTTGAAGTGCGCTCAGTTGACAAAACCTCAATCATTTGGAGTTTTGCTTCAGCTACCTCCAGCACAATTGGAAAATGCATTAAATAGAATTGCAGCACTAAAGGCACCATTGGTTGCTTATGCTAGCCAGCCAGATATACAGTCTACACTTCCCAGGTCTGTGCTGGTTGTTCTGGGAATTGTATCAGAGTCTCAGGTTACAAGTCAGGTACAAACTAGTCAAACAGAGACTGCAGAGACATCCAACTCCGAAAAGGATACGGTGACAGAAAAATCTAAAGAATCATCTACGGCTAGCTGA | 4002 | 0.4383 | MVGKAMAPTSREKLANLFNSAKFAGDVTSKLDTLRRLRRQLPPEDPVILAEFLPSLFEFLSDQFSPVRKFVTEMVGEIGLKNTEFLPDIVPVLIEVLDDDTPAVVRQVILLGIDLFRSTLEKIALQGLYSSDLDSALESAWVWMVKFKDKVYSIAFQHGSGGARLLALKFVEAVIRLYTPDPNGSLEPTPHQGRPMGFNISWLRRGHPVLNVRDLSTEASHSLGLLLDQLRSPTVKSLSNSVIIVLIKSLSAIAIDRPTFYGRILPVLLNLEPPSTVVNGVSVTAAHLALKNAFLTCSKCTHPSAAPWRDRLAGALKEMQSDGKADQVFHLISDINGSLEKEKDVQPLIKKEEHAVNSCDSVHSNLASKRAGSQNGGDLAEDEDVPIKRVKTTSDLKEPKKELGRGTTNSQDDTPSMGPKSSKGDVDNGHVQQLVAMFGALVARGEEAVASLEILISSISADLLADVVMANMHHLPYPNSEGDDELLHDINIIGSDDKAKYPPSFVAGVMSLSSTFPPIASLLGAHQSVSNERSQGDEEVSASGVDSAAVHSGLILTSENVSSPTDFPSSDASIPGVENGCATVPSNIHDIGNIESGIPGLDSFGRSDAYSESLAASSLASSEIQHEETNQEQATSLDQRSPLNLVTSVSTDRSEELSPKAAVADVNSLVSSTATSVVLPSRVVLPKMIAPVVDHSDEQKDQLQKLCFMRIVDAYKQIAVAGGSQVRFSILAYLGVEFPLELDPWKLLQDHILVDYTGHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASAYETFLRTVAEALRDSFPPSDKSLSKLLSESPYLPKSVLKILENMCSPGNGDNIEKESNSLNADRVTQGLSAVWSLILLRPPIRNTCLKIALQSAVHHMEEVRMKAIRLVANKLYPLPSISKQIEDFAKEMLCSVTSDASEATDAEGSLADLQKGPDTEKLANETSSMTSSSKDISPDNRQPVTSESISPESVFEAQRLMSLYFALCTKKHSLFRQIFSIYKSTSKAVKQAVQRQIPILVRTMGSSPDLLEIISDPPIGSESLLMQVLHTLTDGTVPSRDLVVSVKQLHDSKLKDAEVLIPILPFLQKDEVMPAFPSIVNLPLEKFQAALSRMLQGSSQAGPVLTPAEVLIAIHGVDPERDGIPLKKVTDACNACFEQRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILSRLVRKQIWKYPKLWVGFLKCAQLTKPQSFGVLLQLPPAQLENALNRIAALKAPLVAYASQPDIQSTLPRSVLVVLGIVSESQVTSQVQTSQTETAETSNSEKDTVTEKSKESSTAS | 1333 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu02g01957 | 1333 | Gene3D | - | 2 | 341 | IPR011989 | - | |
| Adu02g01957 | 1333 | Pfam | Symplekin tight junction protein C terminal | 1085 | 1263 | IPR022075 | - | |
| Adu02g01957 | 1333 | SUPERFAMILY | ARM repeat | 32 | 1204 | IPR016024 | - | |
| Adu02g01957 | 1333 | MobiDBLite | consensus disorder prediction | 381 | 407 | - | - | |
| Adu02g01957 | 1333 | Pfam | Symplekin/PTA1 N-terminal | 102 | 320 | IPR032460 | - | |
| Adu02g01957 | 1333 | MobiDBLite | consensus disorder prediction | 949 | 979 | - | - | |
| Adu02g01957 | 1333 | MobiDBLite | consensus disorder prediction | 934 | 979 | - | - | |
| Adu02g01957 | 1333 | MobiDBLite | consensus disorder prediction | 620 | 643 | - | - | |
| Adu02g01957 | 1333 | MobiDBLite | consensus disorder prediction | 1302 | 1316 | - | - | |
| Adu02g01957 | 1333 | PANTHER | SYMPLEKIN/PTA1-RELATED | 1 | 1236 | - | - | |
| Adu02g01957 | 1333 | MobiDBLite | consensus disorder prediction | 1302 | 1333 | - | - | |
| Adu02g01957 | 1333 | MobiDBLite | consensus disorder prediction | 367 | 427 | - | - | |
| Adu02g01957 | 1333 | PANTHER | PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED | 1 | 1236 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu02g01957 | Adu-Chr2 | 81527869 | 81540167 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu02g01957 | K06100 | - | gmx:100779360 | 1990.31 |