Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01930 ATGAAAGCCCTCATAAGCAGTTCTTGTTCCAAGGCCATAGTTGGGAGCCTTGGATCAAATATTTATCATAGGAGAGGTGGTGGTGGTGTTGTTGCTGCTCATGTTCCTGGGAGAGTTGAGTTCTGCTTCTCACTGAGATCAAGAAATGACAAAAGGGGCTGCAGCTTTTGGTTCCTTAAGAAAAAGGGTGTAACCCCAATTCATTCAGTGCCACCAAAAACTGAGCCAGATTTGGAAACTGTAGAGCCTCAAGCTCAAAAAAGTGAACAAACAAATGAATCAAAGTTTGTACACGTAACATTTCAGTTGCAAAAGAATTGCTTCTTTGGCGAACAGTTTCTAATAGTTGGAGAAGATCCTATGCTTGGTTCTTGGGACCCTTTAGAGGGATTACCAATGGCCTGGTCTGATGGGCATGTATGGACTGCTAATCTGTCAATTCAGTACAAGTTTATACTGAAACGAAAAGCAGGGAAGATTGTGTGGCAACCGGGCATGAATAGAATCCTCAACATTTCAGAAAATATGAATAGAATAATTGTTAGTGAGGATTGGGAGAAGGCTGAACTTCAGGAAATAATAGAGGAAGATCAAATTGCTCAATCAAATGAGGAACTTCAAGTTGTCTCAGAGACATCTACTTTAGCTGAAAATTCAGATATTCCTAAAGAGGAACTTGTTTCCGGCTTGTCCGAAGCATCAGACCTTGAAGCTAGCGAAAGCCAAACTGATGATGCAGAGAATCCAATTACTGAAGAACCTGAGGTGCAGAAAGAACCTGAGGTGCAGAAACCCAGCAGTGATAGTATTTCTTACTCAACGGAGATGCCATTGGCTATTGTTGCAGAAAACATAGGTTCTTTTGAGGATTCCAGCAACAATACAAGCTATGAGAACAATTTAAGCAATATTCAACTGAATGAACAATCTGCGGATGGTTCCAGAAATGGACATATAAGTATAATGCATAATCTGGTGGACAATGGAAATGCTGAACCACTAATGAATCAGGAGGCAACAGTTAAGGAGACTAAATTATTCGAGTTAGAACCAGCTCCTGTTCTTGTACCTGGTTTAGAGTTGCCTTTTGAAGAAGAAGGTCCTGATGTTGACGTTCAAGAAAGGATTACAATGGAAACTTCAAGTGAAACTTTTGAATCTAAGGATGATGAAGTTCAAGAAAGGACTACCATGAAAACTTCAAGTGAAGCTTTTGAGCCTATGGATCAGAATAAACCAGAGTTCAGTAAGGAGCAAGAATCCAACAACGGCGCACCCCAAGAGATAATTGCAACCATCAAGGACGAGCCACATCACCATTACAATGAACATGAGCAGCATTTTCATCTAGCACCGTCGATGGAGGACAGATCGAATCCCCCGACACATGATGATGACGATGATGAAGAACCAGTAGAAGTAGAAGGAAGAACTTCCCTGGAACTCATCATGAGTTGTGTGATTGTTATGATCCATTTGCCTAGATTTTTGTTGTCCTGGGAAAGATGGATAGGAGCTCAAGAATCCAGATTTAGCCGAAAGCCTCTGTGCTTGGACTTCAAGAGCTCAGCGCCTTTGGTGTTCTCATGCGCCAACGTGCACGAATCTCCCAGCTTTGACTTTGAGCTCCGGAAGGTTTGCCGCGCCCCACTTCTAGTTGCTTCAAGCTGTTTTGTTGGAGTTCAGAAAAGAAATTTTGCTCCACCGTCCATGGCGGACTCGTCTCCAACAATCCTACCGCCGCGGCAGTCACACCCGTGCTTTATAAACTTATTGAACTGGTTGTCCCTCCTTGATCACCGTGCGGCGTGCAATGATTGCAGATGGAAGAGGCTGAAAAGCCGCGGGGATTTATTGAAGCAAGAAACATCTCATTCGGTCAAATCCGCCTATGCCACTATTCGTAGGGAGGCGGCCCGACTTCAGATCTTGAAGCCTACCATCGACGGCGTAGGCGATGCATCACAAGGAGAAATTGGGATCAGACTAGTTGTAAAAAATAGAGCAAACCGAGACGTACAGAGACATAGTCACTTAGAAACTGCTTTCAAGCATTCGTTACTACGGGACAAGGAAGATAAAAGTCATCTCTTCTTCACACACGGTGGAATGAAAAAACACACAAAAAAGACTATTTTAGGATTGTGGGTTACCCAAATTGGTGAAAAAATAATTCCAAGTCATCGAAAAATCAGAACAAGGGAGTCACCGCTTGAGCATCCCAGAGGTCACCAGCAGAGCAGCGGCAGTAAGACCAGAAGAGAGGAAGCAAATTGCAATAGCAGGGCAGCAGCGGCAGTAAGGGCTGAAACTGTGCTAGAAGGTAAGGAGGAAGAAATAGAGACCCAAAATTAG 2355 0.4344 MKALISSSCSKAIVGSLGSNIYHRRGGGGVVAAHVPGRVEFCFSLRSRNDKRGCSFWFLKKKGVTPIHSVPPKTEPDLETVEPQAQKSEQTNESKFVHVTFQLQKNCFFGEQFLIVGEDPMLGSWDPLEGLPMAWSDGHVWTANLSIQYKFILKRKAGKIVWQPGMNRILNISENMNRIIVSEDWEKAELQEIIEEDQIAQSNEELQVVSETSTLAENSDIPKEELVSGLSEASDLEASESQTDDAENPITEEPEVQKEPEVQKPSSDSISYSTEMPLAIVAENIGSFEDSSNNTSYENNLSNIQLNEQSADGSRNGHISIMHNLVDNGNAEPLMNQEATVKETKLFELEPAPVLVPGLELPFEEEGPDVDVQERITMETSSETFESKDDEVQERTTMKTSSEAFEPMDQNKPEFSKEQESNNGAPQEIIATIKDEPHHHYNEHEQHFHLAPSMEDRSNPPTHDDDDDEEPVEVEGRTSLELIMSCVIVMIHLPRFLLSWERWIGAQESRFSRKPLCLDFKSSAPLVFSCANVHESPSFDFELRKVCRAPLLVASSCFVGVQKRNFAPPSMADSSPTILPPRQSHPCFINLLNWLSLLDHRAACNDCRWKRLKSRGDLLKQETSHSVKSAYATIRREAARLQILKPTIDGVGDASQGEIGIRLVVKNRANRDVQRHSHLETAFKHSLLRDKEDKSHLFFTHGGMKKHTKKTILGLWVTQIGEKIIPSHRKIRTRESPLEHPRGHQQSSGSKTRREEANCNSRAAAAVRAETVLEGKEEEIETQN 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01930 784 PANTHER ALPHA-AMYLASE 1 440 - -
Adu02g01930 784 MobiDBLite consensus disorder prediction 68 89 - -
Adu02g01930 784 SUPERFAMILY Starch-binding domain-like 94 180 IPR013784 GO:0030246
Adu02g01930 784 MobiDBLite consensus disorder prediction 452 474 - -
Adu02g01930 784 MobiDBLite consensus disorder prediction 727 758 - -
Adu02g01930 784 MobiDBLite consensus disorder prediction 727 784 - -
Adu02g01930 784 MobiDBLite consensus disorder prediction 381 397 - -
Adu02g01930 784 PANTHER OS01G0856900 PROTEIN 1 440 - -
Adu02g01930 784 MobiDBLite consensus disorder prediction 210 270 - -
Adu02g01930 784 MobiDBLite consensus disorder prediction 379 423 - -
Adu02g01930 784 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 91 187 IPR002044 GO:2001070
Adu02g01930 784 Gene3D Immunoglobulins 87 187 IPR013783 -
Adu02g01930 784 SMART CBM_20_2 96 182 IPR002044 GO:2001070
Adu02g01930 784 CDD CBM20 99 185 - -
Adu02g01930 784 Pfam Starch binding domain 97 177 IPR002044 GO:2001070
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01930 Adu-Chr2 80995068 81040984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01930 514 549 Acyl Lipid Metabolism Gene Families AT3G63200 69.231 3.56e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01930 - - ahf:112727976 907.131