Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01890 ATGTCTTACTACCAATCAGCAGCAAGAATCCCCGATCCatcatggaaAAGTGAAGCTGAAACTATCGAAAAGATTGTTGAAGTTATAACTACTCTACTTGCTTCGGAAGACTTGTTCATCGCAAAGCATCTAGTGGGTGTACAATATCGCATGGAAGATGTGATTCAACAATTACATTCTCACAAACCAGATGATGTCGTGTTAATGGGGATATGGGGGATGGGAGGAGTGGGTAAAACAACCATTGCGAAAAGTGTTTATAATCAAATTCGTCACGAATTTGATAGGCCAATGTTCCTCCCAAACATTCGGGAGATGTGGGAGAATAACCAACAGATTTTTCTGCAAGAACAGGGGGAGGCACTGAAAATACTAAATTATGGCTTTGGAATTAGCGAACATGGAATTAGTTCCCTTGAAGAGCGGAGTCTTATAACATTTGATGAGAAAGATAGAGTTCGAATGCATCCTTTGCTGCGTCACATGGGAAGAGAAATCATTCGAGAGCAATCACAAACTGATGCTCAGCGAAGGACGTACGATGTTTTCGTGAGTTTTCGAGGCAAGGACACTCGTCCAACGTTTACATCACATCTCCATACATCTCTCCAAAATGCTGGAATTGCTGCTTTCAAGGATGATAACGATGTTGATGGACTTCAAAGGGGAGAACGGATTTCAATCGCATTGTTAAAAGCAATTGGATTGTCTGCATGTTCTGTCATTGTTTTTTCAACCCACTATGCTGATTCAAAATGGTGCCTGCAAGAGCTTGAGAATATCATGGTATGCCATAGAACAAAAGGTCAAGTGGTTTTCCCTATATTCTATGAAGTAGATGCCTCAGATGTACGTTATCAAAAGAAAGAGACTGACTTTGGGAAAGCTTTTGAAAGTCTTATAAGTCGAAGATCAGTGGAAGAAGATAAGGTGCTAAGTTGGAGAACAGATCTTCGTGAAGTTAGTAGCTTTTCAGGGACGACTGTGATCAACTCCAGGAACGAAAGTGAAGATATCAAAAGAATTGTTGAACACGTTACTCGTTTATTAGATAAGACAGAGTTGTTCGTTGCAGCGCATCCAGTGGGAGTAGGACCTCGTGTGCAAAAGTTGATTGAAGAATCAAACATTCAAAAGACAAAAgatgttctgatacttgggataaagggcatggggggcgttggtaaaacgactattgccaaagccatctATAACAAAATTGGTCGCGATTTTGATGGCAGGAGCTTCCTCCTGAACATTAGAGAAACATGGCAGCAAGATAATGGAAAGGTTCTCTTGCAACAGCAACTTCTTGAGGATATATTCATTGCAACAAGGATACACATACATAACATTGATTCAGGGATGCAAATATTAAAGGAAAGGCTTGGTGCTaaaagggtactcattgttcttgacgatgtgactgatttggaccaactcaatgctttgtgtggtagtggtgaatgTAGATTATGGTACGATGAGAAAGTGCTTGAACTATTAGAGAATCATGAGGGAACAGAGTTAAAGGCTAAGGGATTGAGTTTGAAGTTGCCAATGACCAATTCCATTTGTTTGAGTAAAGAAGCATTTAAGAGTATGACTAAACTTAAATTGCTTCAACTCGCCGGTGTACAACTTAATGGAGAGTTCAAACATCTTTCAAGATATCTTAGATGGATGAGTTGGCATGGATTTCCTTTGAGACACACTCCCAAAGACTGCTATCAATCAAATATAATTTCCATTGAGTTAGAAAACAGCAAACTCAAAGTTCTGTGGAAGGAGTCCCGGTTGTTGAAACAGCTGAAGATTTTAAATCTTAGTCATTCACATGACTTGATCAAAACCCCAGATTTTTCATACCTACCAAATCTTGAGAAGTTAGTACTCAAGGATTGTACAGAATTGTCTTCAATTTCCTATACCATTGGAACTCTACAAAACATCCTTCATATCAATATAGAAGGATGTACAAACCTTTGTGTACTTCCAAGAAGCATATACAAGTTGCCATCTCTTGAAACTCTCATCCTCTCTGGGTGTTTAAAGATTGATAAGTTAGAAGAAGATGTGGAACAAATGGAATCTTTGGCAGTGCTAAAAGCTGATAACACTGCCATAGCACAAGTGCCCAGTGCGCTAGCAAGATTAAGAAACCTTGGACATGTTTCTTTGTGTGGCTATGAAGGATTGGCATGTGATGTGATTCCTTTAATTATGTTTTGGTTATGGACTTCGCCAAATAATATGTTGTCGTCAGTTATGCAAAAATGTTCATCAAATGTTTTCACTTATGCAAATTGGGGTCCACGGCTTCAGATAAAAGGAGATGTATCTTTGGATACTGGCAATGTTTCAAATTGCAATGAATTGGTGATGCATATTTCTGAATCAAAATCTTCTTTGAATTCCCTTTTGACTCAAATGGGGGTGGACAATTCATTTACAGAGATACTTCAAAAGACCATTTCACAGATGCATGATCCAGATGCAGTTAGCGACATGATATACCAGTATGCCATTGCCCAAGATGAGTTTACAAAGAACGAGAACCTCATCATGGACGTCTCTGGAAACTTCCTTACCCGTGCAGAGGCTGCCGCAGCAGCACCTGGTTCTTGGATAGTTAACAACGAATCTCTAGCAAGCAAATTTGAAGAGTTTGTGGCCGGCGAGTACATCCATTTGAATTCCATTATTGGCGACAACCCATATTGGAAAGAAAACAATATAAGGGATCAAAACCTGCTTATGGGGGCCATTTTGTGGAAGCACCATTGGTGGTGTTATGCACTAGATAGGTCACAGAAGAAATTGTTGGAAGAGTTGCTTGCAGTAGTAGACCCAAAGTATAAAGTCTCCAACAAGGGATTCTCCATAGTATATGCAGACGTACCAAAGCAGAGCAACGGGTATGACTGTGGTGTTTACTCTTACAAATACATGGAGCTATGGAACGTTGGCATGAAATTGCCTCAATACACTGAGGTTAGCAAACCTTTCATTTCCCTTAATTGTCCAACATGGTTTTGGCTTTAG 3045 0.3767 MSYYQSAARIPDPSWKSEAETIEKIVEVITTLLASEDLFIAKHLVGVQYRMEDVIQQLHSHKPDDVVLMGIWGMGGVGKTTIAKSVYNQIRHEFDRPMFLPNIREMWENNQQIFLQEQGEALKILNYGFGISEHGISSLEERSLITFDEKDRVRMHPLLRHMGREIIREQSQTDAQRRTYDVFVSFRGKDTRPTFTSHLHTSLQNAGIAAFKDDNDVDGLQRGERISIALLKAIGLSACSVIVFSTHYADSKWCLQELENIMVCHRTKGQVVFPIFYEVDASDVRYQKKETDFGKAFESLISRRSVEEDKVLSWRTDLREVSSFSGTTVINSRNESEDIKRIVEHVTRLLDKTELFVAAHPVGVGPRVQKLIEESNIQKTKDVLILGIKGMGGVGKTTIAKAIYNKIGRDFDGRSFLLNIRETWQQDNGKVLLQQQLLEDIFIATRIHIHNIDSGMQILKERLGAKRVLIVLDDVTDLDQLNALCGSGECRLWYDEKVLELLENHEGTELKAKGLSLKLPMTNSICLSKEAFKSMTKLKLLQLAGVQLNGEFKHLSRYLRWMSWHGFPLRHTPKDCYQSNIISIELENSKLKVLWKESRLLKQLKILNLSHSHDLIKTPDFSYLPNLEKLVLKDCTELSSISYTIGTLQNILHINIEGCTNLCVLPRSIYKLPSLETLILSGCLKIDKLEEDVEQMESLAVLKADNTAIAQVPSALARLRNLGHVSLCGYEGLACDVIPLIMFWLWTSPNNMLSSVMQKCSSNVFTYANWGPRLQIKGDVSLDTGNVSNCNELVMHISESKSSLNSLLTQMGVDNSFTEILQKTISQMHDPDAVSDMIYQYAIAQDEFTKNENLIMDVSGNFLTRAEAAAAAPGSWIVNNESLASKFEEFVAGEYIHLNSIIGDNPYWKENNIRDQNLLMGAILWKHHWWCYALDRSQKKLLEELLAVVDPKYKVSNKGFSIVYADVPKQSNGYDCGVYSYKYMELWNVGMKLPQYTEVSKPFISLNCPTWFWL 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01890 1014 PRINTS Disease resistance protein signature 670 686 - -
Adu02g01890 1014 PRINTS Disease resistance protein signature 462 476 - -
Adu02g01890 1014 PRINTS Disease resistance protein signature 385 400 - -
Adu02g01890 1014 Pfam TIR domain 180 349 IPR000157 GO:0007165
Adu02g01890 1014 Gene3D - 173 358 IPR035897 -
Adu02g01890 1014 SUPERFAMILY L domain-like 517 807 - -
Adu02g01890 1014 SUPERFAMILY Toll/Interleukin receptor TIR domain 173 326 IPR035897 -
Adu02g01890 1014 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 489 818 IPR044974 GO:0006952
Adu02g01890 1014 SMART till_3 179 324 IPR000157 GO:0007165
Adu02g01890 1014 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 119 176 IPR044974 GO:0006952
Adu02g01890 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 152 IPR027417 -
Adu02g01890 1014 Pfam NB-ARC domain 370 484 IPR002182 GO:0043531
Adu02g01890 1014 Pfam NB-ARC domain 48 100 IPR002182 GO:0043531
Adu02g01890 1014 ProSiteProfiles TIR domain profile. 178 350 IPR000157 GO:0007165
Adu02g01890 1014 ProSiteProfiles Ubiquitin-like protease family profile. 468 987 IPR003653 GO:0006508|GO:0008234
Adu02g01890 1014 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 12 103 - -
Adu02g01890 1014 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 489 818 - -
Adu02g01890 1014 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 103 IPR044974 GO:0006952
Adu02g01890 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 348 489 IPR027417 -
Adu02g01890 1014 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 190 487 - -
Adu02g01890 1014 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 190 487 IPR044974 GO:0006952
Adu02g01890 1014 Pfam Ulp1 protease family, C-terminal catalytic domain 931 988 IPR003653 GO:0006508|GO:0008234
Adu02g01890 1014 Gene3D Ribonuclease Inhibitor 506 855 IPR032675 -
Adu02g01890 1014 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 119 176 - -
Adu02g01890 1014 SUPERFAMILY Cysteine proteinases 907 994 IPR038765 -
Adu02g01890 1014 Gene3D Adenoviral Proteinase; Chain A 905 1002 - -
Adu02g01890 1014 Gene3D - 29 149 IPR027417 -
Adu02g01890 1014 Gene3D - 359 498 IPR027417 -
Adu02g01890 1014 Coils Coil 686 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01890 Adu-Chr2 79929972 79937795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01890 177 350 Miscellaneous Gene Families AT1G57670 34.483 3.29e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01890 - - aip:107625711 917.531