Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01198 ATGTTCTCATCGGTGAGAATCTCTCGGGTTGAGATATTTAGTTATTTACCGGTTTGGCAGTTCTCAATTCCCAGTTCAGCCTCATCCATGGAGTCTCTCTTTTCACTGAAACCCTCTCATCACCACCACCAATCCCTTCTCTCTCTTAATCACCACCATTCAACAACACCATTCTCTTCCGTTCCTTTCCTTTCTCTACCATCTTCCTCCTCTTCCTCTTCCGCTTCCTTTCGATTTTCACCCATCAAAGCCTCACACTCACCCAAAAACCCATTAACCCACGTGACACAAACACTAAACCCCTTCTTCTCACCCATCCTCAAATCAGCATGCATCGCAGCTGCATTGTTCCTCATGCGCCTTCACTTCAATTCTCCCGCCCTCGCCGCTGCCGTTACAGCCGCACCGCAACCACCATCTCCCGCGACGGAATCCTCTCCGGAAGATGCCTCCGGCGAAGAAAAGGTTTCGGGTGAAGAGAACAGCACCGTTGAAGATCTTCAGTCCCTCATCGAAGCAAAGATCAGAGAGCGTAAATTCGACGAAGCGGTTCCGATGGTAGACCGCTTGATTGAAATTGAGCCGGAGGAGCTTGATTGGCCGCTGCTGAAGGCGCACCTGCGTGCCCGCAACAACGACCACGCGGTGGCGCGGAACTTGTTCGAAGAAGTGCTGAAGAGAGACCCTTATAACGTGATTGCGCTTCATGGTCTTCTTGTGGCGGCTTTTGAGTTGAAGGAACCAACAAAGGATTTTATGCCAAGGTTTGAAGAAGCTGTGAAGTTCTTGGAGAAGGAAGAGAGGGATTCTGAGGCAAGGGACTTGAAGCTGCTAATTGCGCAGGTTAAGGTTTTGGAAGGGGAATTATCCAGTGCGCTGAAGGTCTATGAGGATCTTGTGACAAAAGAACCGAAGGATTTTAGGCCTTACTTGTGTAAGGGTGTGGTGTATACTATGATGAAGAAGAAAGATGAAGCTGAAAGACAGTTTGAGAAGTTTAGGGAACTTGTCCCGGAGGATCATCATCACAAAGATTATTTTGAGGACAATGCTAATGTGTTCTTGCAGAAGCTAGAGCAAAAGAAAGAAGCAGCTCTGAAGAGGTGA 1107 0.4824 MFSSVRISRVEIFSYLPVWQFSIPSSASSMESLFSLKPSHHHHQSLLSLNHHHSTTPFSSVPFLSLPSSSSSSSASFRFSPIKASHSPKNPLTHVTQTLNPFFSPILKSACIAAALFLMRLHFNSPALAAAVTAAPQPPSPATESSPEDASGEEKVSGEENSTVEDLQSLIEAKIRERKFDEAVPMVDRLIEIEPEELDWPLLKAHLRARNNDHAVARNLFEEVLKRDPYNVIALHGLLVAAFELKEPTKDFMPRFEEAVKFLEKEERDSEARDLKLLIAQVKVLEGELSSALKVYEDLVTKEPKDFRPYLCKGVVYTMMKKKDEAERQFEKFRELVPEDHHHKDYFEDNANVFLQKLEQKKEAALKR 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01198 368 Gene3D Tetratricopeptide repeat domain 112 367 IPR011990 GO:0005515
Adu02g01198 368 Coils Coil 355 368 - -
Adu02g01198 368 ProSiteProfiles TPR repeat profile. 307 340 IPR019734 GO:0005515
Adu02g01198 368 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 40 360 - -
Adu02g01198 368 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 40 360 - -
Adu02g01198 368 SUPERFAMILY TPR-like 175 340 IPR011990 GO:0005515
Adu02g01198 368 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01198 Adu-Chr2 29211612 29214522 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01198 - - ahf:112727277 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g01198 02 29211612 29214522 Adu02g01198 02 29211612 29214522 ECH
Adu06g01359 06 19547111 19547713 Adu02g01198 02 29211612 29214522 PCT