Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01178 ATGGAATCATCAAATAGACTGAAATATTCGGTGCCAGGAAAGGAAGCACTACCTATCTCTGATACTCTCGACCTTAGGATGTTTGTGGGAACGTGGAATGTTGGAGGGAAATCGCCAGATGAGAATTTGGATTTAAGGGATTGGTTAAAGCTGTCTTCACGGGCTGAGATATTTGTTATTGGGTTCCAAGAAATTATAGCTCTGAATGCAGGGAATGTTCTTGGGCCTGAAGATAACGGCCCAGCATCAAAGTGGCTTAACCTTATTCACAAAGCACTAAACCCTAAAGATGACATCATTATTGAAGAACAAGTACGACATCAAGAAGAAAGAAGTATCAATTGTAAGGCTAGGATGAGTAGTGTATCTAAATGGCTTTGTTTAGAGGAGGAATTATTGGAGTCAGAGGAATTTGGGGACATGATAAATAATAAAGTGCATAGAAGTGGTGGTGATGATGAGAAGAAACAAGGTTATTGCTTAGTAGGAAGCAAGCAAATGGTGGGTATATATTTGTGTGTGTGGGTAAGAGAAGATCTTTGCAAGCATGTCAGTAATTTCAAGGTTTCTTGTGTTGGTAGAGGCATCATGGGCTATCTAGGAAATAAGGGTTCAATATCAATTAGCATGACATTGTACCAAACAAGTTTCTGCTTCGTGTGTACACACTTGGCCTCTGGAGAGAAAGATGGCGATGAAGTCAGAAGAAATTTGGATGTCTCCGAAATATTAAAGAAAACCAAATTTTCTCACTCATTCAAACCCCTTTCTCATCATCATGATAATCCACTACTCTCTCCTGAAACTATATTGAAACATAATAAGATTATTTGGCTTGGTGATTTGAATTATCGGCTTGCAAGTGGTTACGATGACACGCATGAGCTTCTAAAGAAGAATGATTGGCACTCACTATTAGAGAGGGATCAACTAAGGATAGAGCAAAGAGGTGGAAGAGTGTTCAAAGAATGGAAAGAAGGGAAGATATATTTTGCTCCTACTTATAAATACTTGGACAATTCTGACCAATATGTTGCTCAAACTTCCAAGTCCAAGGAAAATCGACGTACCCCCGCTTGGTGTGACCGAATTCTATGGAAAGGTGAAGGGATTGAACAATTGTGGTATGTAAGAGGAGAGTCAAAATTCTCAGACCACAGGCCTGTCTATTCACTCTTTTCAGTTCAAGTGGATTATTTGAAATGTGAGAAGCTTATAACAACAACTACTACTTCCTCTTCTTTTGCAACTACCACCACATCAGAAATCTCAAGGTCATCATGCCTCTCTAGGAGCACCATCACAAATGCTGCCTTGTCGTCTTCTTCGTCGTCATCGTCGTCCAGTGCTGCCAAAATCCAAGCAGGGGAGCAGCTCCTGTTATTAACTAGGGCTCATCAAAGTTGTGTAGATGTCGAATTAGAAGCAAACATAGAAGCAAAAGAAAAAAACGCAGAAGTAGAAGCAAAAACTCAATTAGAAGCTCAAGCAGAAGTAGAAAGCAGAGGCCGAAGCAAGATGCAGAAGCCAAGCAAGAAGCAGAAACAGAAAGGTGCAGCAGCAAGGAGCAGCGGCGAGGTCAGCGACGGCAGTGGCTCACGTCTCCTCTCTCCGTCGCGATTCCCGACGACGACATCGATGACAACTTAA 1650 0.4145 MESSNRLKYSVPGKEALPISDTLDLRMFVGTWNVGGKSPDENLDLRDWLKLSSRAEIFVIGFQEIIALNAGNVLGPEDNGPASKWLNLIHKALNPKDDIIIEEQVRHQEERSINCKARMSSVSKWLCLEEELLESEEFGDMINNKVHRSGGDDEKKQGYCLVGSKQMVGIYLCVWVREDLCKHVSNFKVSCVGRGIMGYLGNKGSISISMTLYQTSFCFVCTHLASGEKDGDEVRRNLDVSEILKKTKFSHSFKPLSHHHDNPLLSPETILKHNKIIWLGDLNYRLASGYDDTHELLKKNDWHSLLERDQLRIEQRGGRVFKEWKEGKIYFAPTYKYLDNSDQYVAQTSKSKENRRTPAWCDRILWKGEGIEQLWYVRGESKFSDHRPVYSLFSVQVDYLKCEKLITTTTTSSSFATTTTSEISRSSCLSRSTITNAALSSSSSSSSSSAAKIQAGEQLLLLTRAHQSCVDVELEANIEAKEKNAEVEAKTQLEAQAEVESRGRSKMQKPSKKQKQKGAAARSSGEVSDGSGSRLLSPSRFPTTTSMTT 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01178 549 SMART i5p_5 23 401 IPR000300 GO:0016791|GO:0046856
Adu02g01178 549 MobiDBLite consensus disorder prediction 485 507 - -
Adu02g01178 549 Gene3D Endonuclease/exonuclease/phosphatase 13 424 IPR036691 -
Adu02g01178 549 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 20 414 - -
Adu02g01178 549 SUPERFAMILY DNase I-like 20 403 IPR036691 -
Adu02g01178 549 MobiDBLite consensus disorder prediction 485 549 - -
Adu02g01178 549 MobiDBLite consensus disorder prediction 526 549 - -
Adu02g01178 549 Pfam Endonuclease/Exonuclease/phosphatase family 30 386 IPR005135 GO:0003824
Adu02g01178 549 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 20 414 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01178 Adu-Chr2 27360915 27373142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01178 5 397 Acyl Lipid Metabolism Gene Families AT1G65580 28.046 1.78e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01178 - - aprc:113870745 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g01178 02 27360915 27373142 Adu02g01178 02 27360915 27373142 ECH
Adu06g01346 06 18840195 18844284 Adu02g01178 02 27360915 27373142 PCT