Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00880 ATGCAACTGTTCCATTTCATGAGTGGGTATCATGGATTTTTCCGAGATTTGGGAGCACTCCTCGGCGCTGACCCATCTCACTCTCTTCTCTTCTCTTCTCTTCTCTCTTTCTCTCTCTCTCGAATGGCCTTCGTTCGCGCACCGTCACCGTTTCTTCTCGTCCTTGTTCTAGCTCTCTCGATCTCCGCCGCCATTACCGCCACCACCACTGTTCCCCAACCGATCTCCGATCATCACCGATCCGCCGCATTGAACCTCTTCGCCCCTTCTCACGGATCGTTTCCCAGTTTGCAGGATGCGTATGAGGCTCTCAGGGTTTTTGAGATTCTAGGGATTGAAGAGAAGCACCGTGTGAGCACGGACACATGTAAGGTGGTGTTGGAAAATCTGAGTTCGTTGTCATCGTCTCTTAAGGATTTGTTCTATGCTTTGAAAGTTAATGGCATATTGAAATGCAAGGTTAATGGGGAGGTTTTCGAGGGTATTGCTTCAAGACTCAAGGCTTCTATCAGCGATGCAAGTCCTTTGCCTGACCTATACTACTCAATAGGAGGTTTGGTTCTCATAAAGGATCAGGATTCAAATGTTGATGTTCTTCTTGCTGATGCCACGGGAACTTTTCAGTCAATCAAGGCTCAAAGCCAAAGTGATGGAAAATGGCGCTACAGTTCTGACAAAACAGAATCCAGTGCCTATGCTGCTGGATTAGCATTTGAAGCCCTTGCTGGAGTGATTTCACTAGCATCATCTGAAATTGATCAGTCTAAGGTCAATACTGTAAAACATGATATACTGAAGCTTTTTGGCAGCATTGAGAAAAATGATGATGGAAGCTTCTATTTTGATGGGGAAACTGTTGGTGGGCATGAGCATCAGGATTCCCTTTCCACGACCTCTTCAGTTGTTCGAGGGGTTACTGCATTTGCTGCTGCAGTTTCTGGAGAAATAAATCTTCCAGGGGATAAAACATTGGGTTTAGCAAAGTTTCTCTTGGGCATTGGAGTCCCAGGAGATGCTAAGGACTTCTTCAATCAAGTTGAATCGTTAGCTTTTCTGGAGAGCAAAAGGCAAGTGCCTATACAAGTCAATCTATTGTTTAAATTTGTTTTACAGCAATATTTCTTTTCCTTCTGTTTCTTGTTCTTCTCAGCCAATGTAACTCTTGACTTATCTTGGTGTAGGGTTACCATCCCATTGATATTGTCACTTCCTGAAACGGTCTATTCATTAACCACGAAAGGCCAACTTAAGGTTCGTGTGAGTACAGCACTTGGTTCAGCCGCACCACCTCTAGTAGTTAAGCTTGTCCGAGCTTTCAGTTCTGGTGCAAAAGATTCAAGTATTATTGAGAGCAAGGAACTCCAGTATGACAAAAGAAGTGGACTTCATGTCTTGGATGGTTTCACAAATAATGTGGATGTGGGAACAGATGTGTTTGTTTTTGAGATTGTGCTTCATGACTCTCACAGTAAACAAGTTTATGCTACCGGCGGCCAAATTCACATGCCTATATATGTTACTGGAATTATTGCAGTCAGCAATGCAGAAATCGGAGTTCTGGGTGACCTTGGAAGTGTCCAGACAAAAAAAGCGCTAGATCTTGCCGGAAATGATGTTGTTTCATTTTCAGCTAACCATCTGCAGAAGTTGCGGTTTTCTTTCCAATTGGCAACTCCTCACGGTCATGTTTTTAAGCCACATCAGGCAATTTTGAAGTTTAGGCATGAGATAAAGGTAGAACACGTCTTTGTGATTGGAAATGTTGGCAAGAAGTTTGAGATCACTCTGGATTTTCTTGGCCTGGTGGAGAAACTGTTCTATCTCTCAGGCAAATATGATATTGAGCTGACTGTTGGTGATGCTGCCATGGAAAACTCTTTCATACGGTTGCTTGGCCATGTCAAATTAGATCTTCCGGAAGCACCTGAGAAGGCAGCCCAACCTCCTGCACCCCCAGTTGACCCGTACTCAAGATATGGGCCCAAAACAGAGATAACTCACTTATTCAGGACCCCTGAAAAGCGACCACCTCAGAATCTCTCTATTACTTTCTTGGGTTTGATCCTTTTGCCATTCCTTGGCTTTTTAATTGGGTTATTACGTTTGGGGGTGAACCTGAAGAATTTCCCCAGTTCAACAGTACCTGCTGCATTTGCCTTGCTGTTCCAACTCAGTATTGCCGCAGTGCTGTTGCTTTATGTACTTTTCTGGTTGAAGCTGGACCTGTTCACTACTCTCAAAACACTTGGCTTTTTGGGAGCTTTCTTGATGTTTTCCGGGCACCGGATTCTCTCCTATCTTGCTTCGACATCAACCAAGTTGAAATCTGCATGA 2334 0.4404 MQLFHFMSGYHGFFRDLGALLGADPSHSLLFSSLLSFSLSRMAFVRAPSPFLLVLVLALSISAAITATTTVPQPISDHHRSAALNLFAPSHGSFPSLQDAYEALRVFEILGIEEKHRVSTDTCKVVLENLSSLSSSLKDLFYALKVNGILKCKVNGEVFEGIASRLKASISDASPLPDLYYSIGGLVLIKDQDSNVDVLLADATGTFQSIKAQSQSDGKWRYSSDKTESSAYAAGLAFEALAGVISLASSEIDQSKVNTVKHDILKLFGSIEKNDDGSFYFDGETVGGHEHQDSLSTTSSVVRGVTAFAAAVSGEINLPGDKTLGLAKFLLGIGVPGDAKDFFNQVESLAFLESKRQVPIQVNLLFKFVLQQYFFSFCFLFFSANVTLDLSWCRVTIPLILSLPETVYSLTTKGQLKVRVSTALGSAAPPLVVKLVRAFSSGAKDSSIIESKELQYDKRSGLHVLDGFTNNVDVGTDVFVFEIVLHDSHSKQVYATGGQIHMPIYVTGIIAVSNAEIGVLGDLGSVQTKKALDLAGNDVVSFSANHLQKLRFSFQLATPHGHVFKPHQAILKFRHEIKVEHVFVIGNVGKKFEITLDFLGLVEKLFYLSGKYDIELTVGDAAMENSFIRLLGHVKLDLPEAPEKAAQPPAPPVDPYSRYGPKTEITHLFRTPEKRPPQNLSITFLGLILLPFLGFLIGLLRLGVNLKNFPSSTVPAAFALLFQLSIAAVLLLYVLFWLKLDLFTTLKTLGFLGAFLMFSGHRILSYLASTSTKLKSA 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00880 777 PANTHER RIBOPHORIN II 382 777 IPR008814 GO:0006487|GO:0008250|GO:0016021
Adu02g00880 777 PANTHER RIBOPHORIN II 54 359 IPR008814 GO:0006487|GO:0008250|GO:0016021
Adu02g00880 777 Pfam Oligosaccharyltransferase subunit Ribophorin II 56 364 IPR008814 GO:0006487|GO:0008250|GO:0016021
Adu02g00880 777 Pfam Oligosaccharyltransferase subunit Ribophorin II 394 769 IPR008814 GO:0006487|GO:0008250|GO:0016021
Adu02g00880 777 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 54 359 - -
Adu02g00880 777 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 382 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00880 Adu-Chr2 14914820 14924915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00880 K12667 - gmx:100806815 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00880 02 14914820 14924915 Adu02g00880 02 14914820 14924915 ECH
Adu06g00086 06 1059088 1066686 Adu02g00880 02 14914820 14924915 PCT