Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00586 ATGGCTTCTTCTCCTTCTTCGATGTGCGCTTCTTACTCTTCAGTAATCTCGAGACCTTTTTATAACTCTCAACCGCAATTCGCGTTCTTCCGTACCGGGAAACTCGGTTCGGTTCCCGATTCGGGTGGGAGGTTCAGGTGTATGGCTGGTCAAACCGGATTCTTCACGAAGCTTGGGAGGCTAATAAAGGAGAAGGCGAAGAGCGACGTTGAGAAGATATTCTCCGGCGGGTTCACGAAGACGCGGAAAAACCTCGTCGTCATCGACGAGCTTCTTCTCTATTGGAATCTCTCCGACACCGATCGAGTACTCGACGAGCTCGAAGAGGCTCTTTTGGTGTCTGATTTTGGACCAAAAATCACTATTAAGATAGTGGAGATTTTGCGTGAGGATATATTGTCAGGGAAGCTCAAATCAGGCACCGAGATAAAGGAAGCACTGAAACAGAATGTCTTGGATTTGTTGACCACTAAGGGGAGTAAAACTGAACTTCAACTTGGATTCAGGAAGCCAGCTGTAATAATGATAGTTGGTGTTAATGGTGGTGGAAAGACAACATCTCTGGGAAAGCTGGCGTATAGACTGAAGAAAGAAGGGGCAAAGATACTGATGGCTGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGCTAGAGATATGGGCTGAAAGGACTGATTGTGAGATTGTTAGGGCTGAATCAGAGAAAGCCAAAGCATCATCAGTGCTTACACAAGCTGTGAAAAAGGGAAAAGAACTAGGTTTCGATATTGTTTTATGCGATACATCTGGACGTTTACACACTAATTACAGCCTAATGGAAGAATTGATTTCTTGTAAAAAGGCAGTGAGCAAAGTCGTTGCTGGTGCCCCTAATGAGATCCTACTGGTTCTGGATGGAACTACAGGTTTGAATATGCTGCCACAGGCAAGAGAGTTCAATGAGGTTGTAGGTGTTACGGGTTTAATTTTGACCAAGCTGGATGGTTCTGCAAGAGGCGGTTGTGTGAAGACCTTCAACCCTTTGATGCAGAGGCCTTTGTCAATGCCATCTTTTCGTAAACCAATGTTAGGTTATGTTAATATGGATCATTTATTAGCAGAAAAGCTTGGCATGGATATGAAGAGCCAATACCAGGTCATAGGAAAGACTGGCAGTGAAGCCATGCTTAGGAGAGGGAAGGCAATCAACGCATTACAAAGCTGTGTAAATGATTTTGTGGTGCAGAGACGATAA 1236 0.4458 MASSPSSMCASYSSVISRPFYNSQPQFAFFRTGKLGSVPDSGGRFRCMAGQTGFFTKLGRLIKEKAKSDVEKIFSGGFTKTRKNLVVIDELLLYWNLSDTDRVLDELEEALLVSDFGPKITIKIVEILREDILSGKLKSGTEIKEALKQNVLDLLTTKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRLKKEGAKILMAAGDTFRAAASDQLEIWAERTDCEIVRAESEKAKASSVLTQAVKKGKELGFDIVLCDTSGRLHTNYSLMEELISCKKAVSKVVAGAPNEILLVLDGTTGLNMLPQAREFNEVVGVTGLILTKLDGSARGGCVKTFNPLMQRPLSMPSFRKPMLGYVNMDHLLAEKLGMDMKSQYQVIGKTGSEAMLRRGKAINALQSCVNDFVVQRR 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00586 411 SMART SRP54_N_2 74 155 IPR013822 GO:0005525|GO:0006614
Adu02g00586 411 SMART SRP54_3 171 371 IPR000897 GO:0005525|GO:0006614
Adu02g00586 411 PANTHER BNAA04G26420D PROTEIN 39 337 - -
Adu02g00586 411 Pfam SRP54-type protein, GTPase domain 171 348 IPR000897 GO:0005525|GO:0006614
Adu02g00586 411 PANTHER SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA 39 337 - -
Adu02g00586 411 SMART AAA_5 170 363 IPR003593 -
Adu02g00586 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 346 IPR027417 -
Adu02g00586 411 Gene3D - 163 351 IPR027417 -
Adu02g00586 411 SUPERFAMILY Domain of the SRP/SRP receptor G-proteins 74 148 IPR036225 -
Adu02g00586 411 Pfam SRP54-type protein, helical bundle domain 100 149 IPR013822 GO:0005525|GO:0006614
Adu02g00586 411 Gene3D - 60 162 IPR042101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00586 Adu-Chr2 7694466 7697921 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00586 K03110 - gmx:100791073 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00586 02 7694466 7697921 Adu02g00586 02 7694466 7697921 ECH