Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00563 ATGGGGCTTTGTTTAGCTAAGGATCAAGATAAAGATGATGATTCTGACCATCATGTGGACATGGTTTCTGGGAATGTGCAACTTATTACCACAAAAGAATCTTGGGACCAAAAGTTGCAAGAATCATCGAAGGATCACAAAATTCTGATTGCAAATTTCAGTGCTGCATGGTGTGGTCCGTGTAAGCTTATTGCACCATATTACTGTGAGTTGTCAGAGAAATACTCATCAATGATCTTCTTACTAGTTGATGTGGATGAACTAACTGATTTTAGTACTTCCTTGGACATCAGAGCCACACCAACCTTCTTCTTTTTTAGAGATGGACAACAAATTGATAAACTCGTAGGAGCCAACAAGCCAGAGTTGGCAAAGAAGGTTGCTTTGTTTTCTACTTCATTTGGTTCCTCAATACCAAATTACCAGTAG 429 0.3893 MGLCLAKDQDKDDDSDHHVDMVSGNVQLITTKESWDQKLQESSKDHKILIANFSAAWCGPCKLIAPYYCELSEKYSSMIFLLVDVDELTDFSTSLDIRATPTFFFFRDGQQIDKLVGANKPELAKKVALFSTSFGSSIPNYQ 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00563 142 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Adu02g00563 142 Pfam Thioredoxin 29 127 IPR013766 -
Adu02g00563 142 PANTHER THIOREDOXIN 1 132 - -
Adu02g00563 142 PANTHER THIOREDOXIN H9 1 132 - -
Adu02g00563 142 PRINTS Thioredoxin family signature 49 57 - -
Adu02g00563 142 PRINTS Thioredoxin family signature 57 66 - -
Adu02g00563 142 PRINTS Thioredoxin family signature 96 107 - -
Adu02g00563 142 SUPERFAMILY Thioredoxin-like 19 127 IPR036249 -
Adu02g00563 142 Gene3D Glutaredoxin 1 134 - -
Adu02g00563 142 CDD TRX_family 33 128 - -
Adu02g00563 142 ProSiteProfiles Thioredoxin domain profile. 6 132 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00563 Adu-Chr2 7397435 7401396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00563 K03671 - gmx:100813401 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02136 04 102560131 102566957 Adu02g00563 02 7397435 7401396 PCT