Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00562 ATGGAGAATCAAAGGAGTGTTATTACCTTGATCCTTTTTCTGATCCTTACTAAAAGCGTAAGTTCAACTGAATTTGATAGCAGTGAATATGAAGAAGGGGAAAGCCATTCCATATCCTTCCAAAGCTCTAGGAGCGAAATGGGAGATGTCGAAGAAGGTGAATGGGAGATGGTGCAAACCAAGGGAAACCAATTTGTGGTGAGGGACCAACCTTTCTATGTGAATGGATTCAACACATACTGGCTGATGGTATTTGCTGCGGACGAGTCCACCAGAGGAAAGGCACTAGATTTTGTGGTGAGTGAAGCAAAGAAATACAGAATAAGGCTCATACTGTCATTGGTAAACAACTGGGAGGCTTATGGCGGCAAAGCGCAGTATGTCAAATGGGGAACTGCTGCCGGCCTCAACTTGACCTCCGATGACGACTTCTTCTCACATCCAACTCTCAGAAACTACTACAAGAACCATGTTAAGACGGTGCTCAACAGAGTAAATACATACACAAACATCACCTACAAGGAAGACCCTACAATTTTCGCTTGGGAACTCATGAATGAGCCTCGATGTATCTTGGATTCCTCAGGTGATACATTACAGGAATGGATAAAAGAAATGGCATTCTATGTGAAGAGCATTGATACGAAGCACCTAGTGGAGATTGGTCTTGAAGGATTTTACGGACCCTCGACACCTCAAAGAGTTCAGTTCAACCCAAACGTATTTGCTCAACAGGTTGGAACTGATTTTATCAGGAACCACCAGGTTCTCGGTGTAGACTTTGCTTCTGTTCACATCTATCCAGACTCTTGGATTTCACAATCAATTGCTGATACCCATCTCCCATTCATAAAGTCTTGGATGGAAGCCCACATCGAGGATGCTGAAAAGTACCTTGGAATGCCCGTCATTTTTGCCGAGTTTGGTGTATCTTCAAAAGATCCTGGTTACAATTCATCATACAGAGACAACCTCATAAACACAGTGTACAAGACCATCCTTAACTCCACAAAGAACGGAGGTAGCGGGGCTGGAAGCCTTTTGTGGCAGCTCTTTCCTGATGGAACAGACTACATGGATGATGGATATTCAATTGTTCTCTCAAAATCTCCTTCCACCTCAAGCATCATATCCCTTCAATCCACAAGGCTTGCTCTGTTCAACTCCTTGTGTTCTAAGAGATGTCACTGGAGTTGTAAGAAGAAAAGCATGTTCCAAAAAGTACTATATCATGATGAGCTCTAA 1245 0.4313 MENQRSVITLILFLILTKSVSSTEFDSSEYEEGESHSISFQSSRSEMGDVEEGEWEMVQTKGNQFVVRDQPFYVNGFNTYWLMVFAADESTRGKALDFVVSEAKKYRIRLILSLVNNWEAYGGKAQYVKWGTAAGLNLTSDDDFFSHPTLRNYYKNHVKTVLNRVNTYTNITYKEDPTIFAWELMNEPRCILDSSGDTLQEWIKEMAFYVKSIDTKHLVEIGLEGFYGPSTPQRVQFNPNVFAQQVGTDFIRNHQVLGVDFASVHIYPDSWISQSIADTHLPFIKSWMEAHIEDAEKYLGMPVIFAEFGVSSKDPGYNSSYRDNLINTVYKTILNSTKNGGSGAGSLLWQLFPDGTDYMDDGYSIVLSKSPSTSSIISLQSTRLALFNSLCSKRCHWSCKKKSMFQKVLYHDEL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00562 414 Gene3D Glycosidases 55 387 - -
Adu02g00562 414 PANTHER - 94 414 IPR045053 GO:0004553
Adu02g00562 414 PANTHER - 7 94 IPR045053 GO:0004553
Adu02g00562 414 SUPERFAMILY (Trans)glycosidases 56 372 IPR017853 -
Adu02g00562 414 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 94 414 - -
Adu02g00562 414 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 7 94 - -
Adu02g00562 414 Pfam Cellulase (glycosyl hydrolase family 5) 97 329 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00562 Adu-Chr2 7379107 7380997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00562 5 414 Glycoside Hydrolase AT5G01930 60.352 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00562 K19355 - gmx:100801139 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02132 04 102513311 102517913 Adu02g00562 02 7379107 7380997 PCT